Cluster: A142.bin_5_CGC3
🧬 Cluster Details
- Gene Count: 5
- CAZyme Count: 1
- Substrate:
- Genome ID: A142.bin_5
- CGC Family ID: CGCFAM_06641
- Continent: Asia
- Source Study: Jin et al., 2023 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | A142_contig_257 | A142_contig_257_18 | 18066 | 19550 | + | 3.A.1.2.20 |
| TC | A142_contig_257 | A142_contig_257_19 | 19550 | 20590 | + | 3.A.1.2.15 |
| pfam | A142_contig_257 | A142_contig_257_20 | 20766 | 21629 | + | F_bP_aldolase |
| STP | A142_contig_257 | A142_contig_257_21 | 21909 | 23528 | + | Pkinase |
| CAZyme | A142_contig_257 | A142_contig_257_22 | 23614 | 24936 | - | GH4 |
Gene ID: A142_contig_257_18
Type: TC
Location: 18066 - 19550 (+)
Type: TC
Location: 18066 - 19550 (+)
Gene ID: A142_contig_257_19
Type: TC
Location: 19550 - 20590 (+)
Type: TC
Location: 19550 - 20590 (+)
Gene ID: A142_contig_257_20
Type: pfam
Location: 20766 - 21629 (+)
Type: pfam
Location: 20766 - 21629 (+)
Gene ID: A142_contig_257_21
Type: STP
Location: 21909 - 23528 (+)
Type: STP
Location: 21909 - 23528 (+)
Gene ID: A142_contig_257_22
Type: CAZyme
Location: 23614 - 24936 (-)
Type: CAZyme
Location: 23614 - 24936 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Oscillospirales
Family
Acutalibacteraceae
Genus
Hominenteromicrobium
Species
Hominenteromicrobium mulieris
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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Differentially Abundant Genes
| Gene ID | Condition Pair | log2FC | FDR P-value |
|---|---|---|---|
| A142_contig_257_20 | vegan > omnivore | 1.10652 | 0.02258 |
| A142_contig_257_22 | vegetarian > omnivore | 1.32140 | 0.00845 |
| A142_contig_257_22 | vegetarian > vegan | 1.08249 | 0.00029 |