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Cluster: A142.bin_5_CGC24

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC A142_contig_257 A142_contig_257_2121 2300791 2301759 + 3.A.1.1.29
TC A142_contig_257 A142_contig_257_2122 2301775 2302701 + 3.A.1.1.29
NULL(UNKNOWN) A142_contig_257 A142_contig_257_2123 2302769 2304559 + NULL(UNKNOWN)
[View Structural Homologs]
TC A142_contig_257 A142_contig_257_2124 2304649 2305335 - 2.A.107.1.2
CAZyme A142_contig_257 A142_contig_257_2125 2305693 2308332 + CBM67 | GH78
pfam A142_contig_257 A142_contig_257_2126 2308633 2309271 - TMP-TENI
pfam A142_contig_257 A142_contig_257_2127 2309288 2310097 - HK
TC A142_contig_257 A142_contig_257_2128 2310054 2310608 - 3.A.1.26.7
Gene ID: A142_contig_257_2121
Type: TC
Location: 2300791 - 2301759 (+)
Gene ID: A142_contig_257_2122
Type: TC
Location: 2301775 - 2302701 (+)
Gene ID: A142_contig_257_2123
Type:
Location: 2302769 - 2304559 (+)
Gene ID: A142_contig_257_2124
Type: TC
Location: 2304649 - 2305335 (-)
Gene ID: A142_contig_257_2125
Type: CAZyme
Location: 2305693 - 2308332 (+)
Gene ID: A142_contig_257_2126
Type: pfam
Location: 2308633 - 2309271 (-)
Gene ID: A142_contig_257_2127
Type: pfam
Location: 2309288 - 2310097 (-)
Gene ID: A142_contig_257_2128
Type: TC
Location: 2310054 - 2310608 (-)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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Differentially Abundant Genes

Gene ID Condition Pair log2FC FDR P-value
A142_contig_257_2128 vegetarian > vegan 1.24450 0.00029

🧭 Explore Read Mapping of CGC

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