Cluster: A142.bin_5_CGC2
🧬 Cluster Details
- Gene Count: 6
- CAZyme Count: 1
- Substrate:
- Genome ID: A142.bin_5
- CGC Family ID: CGCFAM_06639
- Continent: Asia
- Source Study: Jin et al., 2023 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | A142_contig_273 | A142_contig_273_18 | 14025 | 15356 | - | 2.A.66.1.28 |
| pfam | A142_contig_273 | A142_contig_273_19 | 15739 | 16035 | + | OAD_gamma |
| TC | A142_contig_273 | A142_contig_273_20 | 16078 | 16434 | + | 3.B.1.1.2 |
| TC | A142_contig_273 | A142_contig_273_21 | 16488 | 17684 | + | 3.B.1.1.1 |
| TC | A142_contig_273 | A142_contig_273_22 | 17715 | 19163 | + | 3.B.1.1.1 |
| CAZyme | A142_contig_273 | A142_contig_273_23 | 19501 | 20805 | + | GH29 |
Gene ID: A142_contig_273_18
Type: TC
Location: 14025 - 15356 (-)
Type: TC
Location: 14025 - 15356 (-)
Gene ID: A142_contig_273_19
Type: pfam
Location: 15739 - 16035 (+)
Type: pfam
Location: 15739 - 16035 (+)
Gene ID: A142_contig_273_20
Type: TC
Location: 16078 - 16434 (+)
Type: TC
Location: 16078 - 16434 (+)
Gene ID: A142_contig_273_21
Type: TC
Location: 16488 - 17684 (+)
Type: TC
Location: 16488 - 17684 (+)
Gene ID: A142_contig_273_22
Type: TC
Location: 17715 - 19163 (+)
Type: TC
Location: 17715 - 19163 (+)
Gene ID: A142_contig_273_23
Type: CAZyme
Location: 19501 - 20805 (+)
Type: CAZyme
Location: 19501 - 20805 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Oscillospirales
Family
Acutalibacteraceae
Genus
Hominenteromicrobium
Species
Hominenteromicrobium mulieris
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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Differentially Abundant Genes
| Gene ID | Condition Pair | log2FC | FDR P-value |
|---|---|---|---|
| A142_contig_273_19 | vegetarian > vegan | 1.08961 | 0.00029 |