dbCAN Logo

Cluster: A142.bin_5_CGC18

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
CAZyme A142_contig_257 A142_contig_257_1798 1945312 1946961 - GH13_31
TC A142_contig_257 A142_contig_257_1799 1948056 1950071 + 3.A.1.5.13
TC A142_contig_257 A142_contig_257_1800 1950235 1951233 + 3.A.1.5.13
TC A142_contig_257 A142_contig_257_1801 1951251 1952096 + 3.A.1.5.30
TC A142_contig_257 A142_contig_257_1802 1952102 1953082 + 3.A.1.5.13
TC A142_contig_257 A142_contig_257_1803 1953075 1954058 + 3.A.1.5.13
TC A142_contig_257 A142_contig_257_1804 1954339 1955754 + 2.A.66.1.10
Gene ID: A142_contig_257_1798
Type: CAZyme
Location: 1945312 - 1946961 (-)
Gene ID: A142_contig_257_1799
Type: TC
Location: 1948056 - 1950071 (+)
Gene ID: A142_contig_257_1800
Type: TC
Location: 1950235 - 1951233 (+)
Gene ID: A142_contig_257_1801
Type: TC
Location: 1951251 - 1952096 (+)
Gene ID: A142_contig_257_1802
Type: TC
Location: 1952102 - 1953082 (+)
Gene ID: A142_contig_257_1803
Type: TC
Location: 1953075 - 1954058 (+)
Gene ID: A142_contig_257_1804
Type: TC
Location: 1954339 - 1955754 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

Loading chart...

Differentially Abundant Genes

Gene ID Condition Pair log2FC FDR P-value
A142_contig_257_1799 vegetarian > vegan 1.02862 0.00029

🧭 Explore Read Mapping of CGC

← Back to Cluster List