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Cluster: A142.bin_5_CGC16

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC A142_contig_257 A142_contig_257_1563 1706505 1708256 + 3.A.1.5.2
TC A142_contig_257 A142_contig_257_1564 1708681 1709616 + 3.A.1.5.25
TC A142_contig_257 A142_contig_257_1565 1709619 1710572 + 3.A.1.5.2
TC A142_contig_257 A142_contig_257_1566 1710579 1711592 + 3.A.1.5.2
TC A142_contig_257 A142_contig_257_1567 1711582 1712550 + 3.A.1.5.20
pfam A142_contig_257 A142_contig_257_1568 1712699 1713496 - Zn_dep_PLPC
CAZyme A142_contig_257 A142_contig_257_1569 1713699 1716461 + GH3
peptidase A142_contig_257 A142_contig_257_1570 1716630 1717913 + M28.UPF
CAZyme A142_contig_257 A142_contig_257_1571 1717910 1719019 + CE2
Gene ID: A142_contig_257_1563
Type: TC
Location: 1706505 - 1708256 (+)
Gene ID: A142_contig_257_1564
Type: TC
Location: 1708681 - 1709616 (+)
Gene ID: A142_contig_257_1565
Type: TC
Location: 1709619 - 1710572 (+)
Gene ID: A142_contig_257_1566
Type: TC
Location: 1710579 - 1711592 (+)
Gene ID: A142_contig_257_1567
Type: TC
Location: 1711582 - 1712550 (+)
Gene ID: A142_contig_257_1568
Type: pfam
Location: 1712699 - 1713496 (-)
Gene ID: A142_contig_257_1569
Type: CAZyme
Location: 1713699 - 1716461 (+)
Gene ID: A142_contig_257_1570
Type: peptidase
Location: 1716630 - 1717913 (+)
Gene ID: A142_contig_257_1571
Type: CAZyme
Location: 1717910 - 1719019 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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