Cluster: A142.bin_5_CGC14
🧬 Cluster Details
- Gene Count: 10
- CAZyme Count: 2
- Substrate:
- Genome ID: A142.bin_5
- CGC Family ID: CGCFAM_02363
- Continent: Asia
- Source Study: Jin et al., 2023 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | A142_contig_257 | A142_contig_257_1384 | 1508834 | 1509793 | - | 8.A.5.1.4 |
| TF | A142_contig_257 | A142_contig_257_1385 | 1509845 | 1511329 | - | HTH_AraC | HTH_AraC |
| TC | A142_contig_257 | A142_contig_257_1386 | 1511437 | 1513140 | - | 8.A.59.2.1 |
| NULL(UNKNOWN) | A142_contig_257 | A142_contig_257_1387 | 1513339 | 1514790 | + |
NULL(UNKNOWN)
[View Structural Homologs] |
| pfam | A142_contig_257 | A142_contig_257_1388 | 1514969 | 1515742 | - | ThuA |
| CAZyme | A142_contig_257 | A142_contig_257_1389 | 1515771 | 1516847 | - | GH179 |
| TC | A142_contig_257 | A142_contig_257_1390 | 1516992 | 1518653 | - | 3.A.1.1.29 |
| TC | A142_contig_257 | A142_contig_257_1391 | 1518749 | 1519654 | - | 3.A.1.1.29 |
| TC | A142_contig_257 | A142_contig_257_1392 | 1519705 | 1520670 | - | 3.A.1.1.10 |
| CAZyme | A142_contig_257 | A142_contig_257_1393 | 1521315 | 1522472 | - | GH109 |
Gene ID: A142_contig_257_1384
Type: TC
Location: 1508834 - 1509793 (-)
Type: TC
Location: 1508834 - 1509793 (-)
Gene ID: A142_contig_257_1385
Type: TF
Location: 1509845 - 1511329 (-)
Type: TF
Location: 1509845 - 1511329 (-)
Gene ID: A142_contig_257_1386
Type: TC
Location: 1511437 - 1513140 (-)
Type: TC
Location: 1511437 - 1513140 (-)
Gene ID: A142_contig_257_1387
Type:
Location: 1513339 - 1514790 (+)
Type:
Location: 1513339 - 1514790 (+)
Gene ID: A142_contig_257_1388
Type: pfam
Location: 1514969 - 1515742 (-)
Type: pfam
Location: 1514969 - 1515742 (-)
Gene ID: A142_contig_257_1389
Type: CAZyme
Location: 1515771 - 1516847 (-)
Type: CAZyme
Location: 1515771 - 1516847 (-)
Gene ID: A142_contig_257_1390
Type: TC
Location: 1516992 - 1518653 (-)
Type: TC
Location: 1516992 - 1518653 (-)
Gene ID: A142_contig_257_1391
Type: TC
Location: 1518749 - 1519654 (-)
Type: TC
Location: 1518749 - 1519654 (-)
Gene ID: A142_contig_257_1392
Type: TC
Location: 1519705 - 1520670 (-)
Type: TC
Location: 1519705 - 1520670 (-)
Gene ID: A142_contig_257_1393
Type: CAZyme
Location: 1521315 - 1522472 (-)
Type: CAZyme
Location: 1521315 - 1522472 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Oscillospirales
Family
Acutalibacteraceae
Genus
Hominenteromicrobium
Species
Hominenteromicrobium mulieris
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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Differentially Abundant Genes
| Gene ID | Condition Pair | log2FC | FDR P-value |
|---|---|---|---|
| A142_contig_257_1385 | vegetarian > vegan | 1.24410 | 0.00029 |
| A142_contig_257_1386 | vegetarian > vegan | 1.02267 | 0.00029 |
| A142_contig_257_1387 | vegetarian > vegan | 1.06623 | 0.00029 |
| A142_contig_257_1388 | vegetarian > vegan | 1.31383 | 0.00029 |
| A142_contig_257_1391 | vegetarian > vegan | 1.32024 | 0.00029 |