Cluster: A142.bin_5_CGC13
🧬 Cluster Details
- Gene Count: 9
- CAZyme Count: 1
- Substrate:
- Genome ID: A142.bin_5
- CGC Family ID: CGCFAM_04307
- Continent: Asia
- Source Study: Jin et al., 2023 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | A142_contig_257 | A142_contig_257_1351 | 1469536 | 1470840 | - | 2.A.25.1.3 |
| pfam | A142_contig_257 | A142_contig_257_1352 | 1470837 | 1471376 | - | Amidase_3 |
| CAZyme | A142_contig_257 | A142_contig_257_1353 | 1471392 | 1472300 | - | CE4 |
| peptidase | A142_contig_257 | A142_contig_257_1354 | 1472418 | 1473518 | - | S33.UPW |
| TC | A142_contig_257 | A142_contig_257_1355 | 1473565 | 1474266 | - | 1.C.113.1.10 |
| TC | A142_contig_257 | A142_contig_257_1356 | 1474780 | 1476684 | + | 3.A.1.106.8 |
| TC | A142_contig_257 | A142_contig_257_1357 | 1476709 | 1478517 | + | 3.A.1.106.3 |
| pfam | A142_contig_257 | A142_contig_257_1358 | 1478818 | 1479588 | - | Carboxyl_trans | ACCA |
| TC | A142_contig_257 | A142_contig_257_1359 | 1479588 | 1480499 | - | 3.B.1.1.2 |
Gene ID: A142_contig_257_1351
Type: TC
Location: 1469536 - 1470840 (-)
Type: TC
Location: 1469536 - 1470840 (-)
Gene ID: A142_contig_257_1352
Type: pfam
Location: 1470837 - 1471376 (-)
Type: pfam
Location: 1470837 - 1471376 (-)
Gene ID: A142_contig_257_1353
Type: CAZyme
Location: 1471392 - 1472300 (-)
Type: CAZyme
Location: 1471392 - 1472300 (-)
Gene ID: A142_contig_257_1354
Type: peptidase
Location: 1472418 - 1473518 (-)
Type: peptidase
Location: 1472418 - 1473518 (-)
Gene ID: A142_contig_257_1355
Type: TC
Location: 1473565 - 1474266 (-)
Type: TC
Location: 1473565 - 1474266 (-)
Gene ID: A142_contig_257_1356
Type: TC
Location: 1474780 - 1476684 (+)
Type: TC
Location: 1474780 - 1476684 (+)
Gene ID: A142_contig_257_1357
Type: TC
Location: 1476709 - 1478517 (+)
Type: TC
Location: 1476709 - 1478517 (+)
Gene ID: A142_contig_257_1358
Type: pfam
Location: 1478818 - 1479588 (-)
Type: pfam
Location: 1478818 - 1479588 (-)
Gene ID: A142_contig_257_1359
Type: TC
Location: 1479588 - 1480499 (-)
Type: TC
Location: 1479588 - 1480499 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Oscillospirales
Family
Acutalibacteraceae
Genus
Hominenteromicrobium
Species
Hominenteromicrobium mulieris
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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Differentially Abundant Genes
| Gene ID | Condition Pair | log2FC | FDR P-value |
|---|---|---|---|
| A142_contig_257_1351 | vegetarian > vegan | 1.38726 | 0.00029 |
| A142_contig_257_1352 | vegetarian > vegan | 1.12856 | 0.00029 |
| A142_contig_257_1353 | vegetarian > vegan | 1.28354 | 0.00029 |
| A142_contig_257_1355 | vegetarian > vegan | 1.12539 | 0.00029 |