Cluster: A142.bin_5_CGC12
🧬 Cluster Details
- Gene Count: 6
- CAZyme Count: 2
- Substrate:
- Genome ID: A142.bin_5
- CGC Family ID: CGCFAM_03037
- Continent: Asia
- Source Study: Jin et al., 2023 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | A142_contig_257 | A142_contig_257_1289 | 1408666 | 1409793 | - | GH179 |
| pfam | A142_contig_257 | A142_contig_257_1290 | 1409886 | 1410773 | - | AP_endonuc_2 |
| pfam | A142_contig_257 | A142_contig_257_1291 | 1410793 | 1411914 | - | GFO_IDH_MocA | GFO_IDH_MocA_C | GFO_IDH_MocA_C3 |
| CAZyme | A142_contig_257 | A142_contig_257_1292 | 1411950 | 1413047 | - | GH179 |
| TF | A142_contig_257 | A142_contig_257_1293 | 1413227 | 1414798 | - | HTH_AraC | HTH_AraC |
| TC | A142_contig_257 | A142_contig_257_1294 | 1414791 | 1416563 | - | 8.A.59.2.1 |
Gene ID: A142_contig_257_1289
Type: CAZyme
Location: 1408666 - 1409793 (-)
Type: CAZyme
Location: 1408666 - 1409793 (-)
Gene ID: A142_contig_257_1290
Type: pfam
Location: 1409886 - 1410773 (-)
Type: pfam
Location: 1409886 - 1410773 (-)
Gene ID: A142_contig_257_1291
Type: pfam
Location: 1410793 - 1411914 (-)
Type: pfam
Location: 1410793 - 1411914 (-)
Gene ID: A142_contig_257_1292
Type: CAZyme
Location: 1411950 - 1413047 (-)
Type: CAZyme
Location: 1411950 - 1413047 (-)
Gene ID: A142_contig_257_1293
Type: TF
Location: 1413227 - 1414798 (-)
Type: TF
Location: 1413227 - 1414798 (-)
Gene ID: A142_contig_257_1294
Type: TC
Location: 1414791 - 1416563 (-)
Type: TC
Location: 1414791 - 1416563 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Oscillospirales
Family
Acutalibacteraceae
Genus
Hominenteromicrobium
Species
Hominenteromicrobium mulieris
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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Differentially Abundant Genes
| Gene ID | Condition Pair | log2FC | FDR P-value |
|---|---|---|---|
| A142_contig_257_1289 | vegetarian > vegan | 2.41147 | 0.00029 |
| A142_contig_257_1290 | vegetarian > vegan | 3.13239 | 0.00029 |
| A142_contig_257_1291 | vegetarian > vegan | 1.87424 | 0.00029 |
| A142_contig_257_1292 | vegetarian > vegan | 1.64488 | 0.00029 |
| A142_contig_257_1294 | vegetarian > vegan | 1.33669 | 0.00029 |