Cluster: A142.bin_5_CGC11
🧬 Cluster Details
- Gene Count: 11
- CAZyme Count: 3
- Substrate:
- Genome ID: A142.bin_5
- Continent: Asia
- Source Study: Jin et al., 2023 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | A142_contig_257 | A142_contig_257_1119 | 1219796 | 1220872 | - | GH179 |
| pfam | A142_contig_257 | A142_contig_257_1120 | 1220899 | 1221663 | - | ThuA |
| pfam | A142_contig_257 | A142_contig_257_1121 | 1221898 | 1223610 | - | HATPase_c | His_kinase |
| TC | A142_contig_257 | A142_contig_257_1122 | 1223700 | 1224608 | - | 3.A.1.1.10 |
| TC | A142_contig_257 | A142_contig_257_1123 | 1224634 | 1225578 | - | 3.A.1.1.10 |
| TF | A142_contig_257 | A142_contig_257_1124 | 1225632 | 1227245 | - | HTH_AraC |
| STP | A142_contig_257 | A142_contig_257_1125 | 1227382 | 1229007 | - | SBP_bac_1 |
| CAZyme | A142_contig_257 | A142_contig_257_1126 | 1229340 | 1232702 | + | GH31_3 |
| TF | A142_contig_257 | A142_contig_257_1127 | 1233015 | 1235054 | + | LacI |
| pfam | A142_contig_257 | A142_contig_257_1128 | 1235492 | 1236304 | + | AP_endonuc_2 |
| CAZyme | A142_contig_257 | A142_contig_257_1129 | 1236378 | 1237553 | + | GH179 |
Gene ID: A142_contig_257_1119
Type: CAZyme
Location: 1219796 - 1220872 (-)
Type: CAZyme
Location: 1219796 - 1220872 (-)
Gene ID: A142_contig_257_1120
Type: pfam
Location: 1220899 - 1221663 (-)
Type: pfam
Location: 1220899 - 1221663 (-)
Gene ID: A142_contig_257_1121
Type: pfam
Location: 1221898 - 1223610 (-)
Type: pfam
Location: 1221898 - 1223610 (-)
Gene ID: A142_contig_257_1122
Type: TC
Location: 1223700 - 1224608 (-)
Type: TC
Location: 1223700 - 1224608 (-)
Gene ID: A142_contig_257_1123
Type: TC
Location: 1224634 - 1225578 (-)
Type: TC
Location: 1224634 - 1225578 (-)
Gene ID: A142_contig_257_1124
Type: TF
Location: 1225632 - 1227245 (-)
Type: TF
Location: 1225632 - 1227245 (-)
Gene ID: A142_contig_257_1125
Type: STP
Location: 1227382 - 1229007 (-)
Type: STP
Location: 1227382 - 1229007 (-)
Gene ID: A142_contig_257_1126
Type: CAZyme
Location: 1229340 - 1232702 (+)
Type: CAZyme
Location: 1229340 - 1232702 (+)
Gene ID: A142_contig_257_1127
Type: TF
Location: 1233015 - 1235054 (+)
Type: TF
Location: 1233015 - 1235054 (+)
Gene ID: A142_contig_257_1128
Type: pfam
Location: 1235492 - 1236304 (+)
Type: pfam
Location: 1235492 - 1236304 (+)
Gene ID: A142_contig_257_1129
Type: CAZyme
Location: 1236378 - 1237553 (+)
Type: CAZyme
Location: 1236378 - 1237553 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Oscillospirales
Family
Acutalibacteraceae
Genus
Hominenteromicrobium
Species
Hominenteromicrobium mulieris
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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Differentially Abundant Genes
| Gene ID | Condition Pair | log2FC | FDR P-value |
|---|---|---|---|
| A142_contig_257_1128 | vegetarian > vegan | 1.13570 | 0.00029 |