Cluster: A142.bin_5_CGC10
🧬 Cluster Details
- Gene Count: 12
- CAZyme Count: 2
- Substrate:
- Genome ID: A142.bin_5
- CGC Family ID: CGCFAM_06637
- Continent: Asia
- Source Study: Jin et al., 2023 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | A142_contig_257 | A142_contig_257_944 | 1013355 | 1015133 | - | 3.A.1.106.2 |
| TC | A142_contig_257 | A142_contig_257_945 | 1015245 | 1016855 | - | 2.A.66.2.14 |
| TC | A142_contig_257 | A142_contig_257_946 | 1017043 | 1018365 | - | 2.A.38.4.5 |
| TC | A142_contig_257 | A142_contig_257_947 | 1018457 | 1018996 | - | 2.A.88.9.2 |
| TC | A142_contig_257 | A142_contig_257_948 | 1019515 | 1020387 | - | 3.A.1.3.14 |
| TC | A142_contig_257 | A142_contig_257_949 | 1020443 | 1021186 | - | 3.A.1.3.13 |
| TC | A142_contig_257 | A142_contig_257_950 | 1021190 | 1021867 | - | 3.A.1.3.14 |
| CAZyme | A142_contig_257 | A142_contig_257_951 | 1022165 | 1025002 | - | GH3 |
| CAZyme | A142_contig_257 | A142_contig_257_952 | 1025087 | 1027762 | - | GH2 |
| TC | A142_contig_257 | A142_contig_257_953 | 1028009 | 1029676 | - | 3.A.1.1.9 |
| TC | A142_contig_257 | A142_contig_257_954 | 1029757 | 1030647 | - | 3.A.1.1.29 |
| TC | A142_contig_257 | A142_contig_257_955 | 1030661 | 1031611 | - | 3.A.1.1.10 |
Gene ID: A142_contig_257_944
Type: TC
Location: 1013355 - 1015133 (-)
Type: TC
Location: 1013355 - 1015133 (-)
Gene ID: A142_contig_257_945
Type: TC
Location: 1015245 - 1016855 (-)
Type: TC
Location: 1015245 - 1016855 (-)
Gene ID: A142_contig_257_946
Type: TC
Location: 1017043 - 1018365 (-)
Type: TC
Location: 1017043 - 1018365 (-)
Gene ID: A142_contig_257_947
Type: TC
Location: 1018457 - 1018996 (-)
Type: TC
Location: 1018457 - 1018996 (-)
Gene ID: A142_contig_257_948
Type: TC
Location: 1019515 - 1020387 (-)
Type: TC
Location: 1019515 - 1020387 (-)
Gene ID: A142_contig_257_949
Type: TC
Location: 1020443 - 1021186 (-)
Type: TC
Location: 1020443 - 1021186 (-)
Gene ID: A142_contig_257_950
Type: TC
Location: 1021190 - 1021867 (-)
Type: TC
Location: 1021190 - 1021867 (-)
Gene ID: A142_contig_257_951
Type: CAZyme
Location: 1022165 - 1025002 (-)
Type: CAZyme
Location: 1022165 - 1025002 (-)
Gene ID: A142_contig_257_952
Type: CAZyme
Location: 1025087 - 1027762 (-)
Type: CAZyme
Location: 1025087 - 1027762 (-)
Gene ID: A142_contig_257_953
Type: TC
Location: 1028009 - 1029676 (-)
Type: TC
Location: 1028009 - 1029676 (-)
Gene ID: A142_contig_257_954
Type: TC
Location: 1029757 - 1030647 (-)
Type: TC
Location: 1029757 - 1030647 (-)
Gene ID: A142_contig_257_955
Type: TC
Location: 1030661 - 1031611 (-)
Type: TC
Location: 1030661 - 1031611 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Oscillospirales
Family
Acutalibacteraceae
Genus
Hominenteromicrobium
Species
Hominenteromicrobium mulieris
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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Differentially Abundant Genes
| Gene ID | Condition Pair | log2FC | FDR P-value |
|---|---|---|---|
| A142_contig_257_947 | vegetarian > vegan | 1.12636 | 0.00029 |
| A142_contig_257_955 | vegetarian > vegan | 1.35212 | 0.00029 |