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Cluster: A130.bin_2_CGC3

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
CAZyme A130_contig_1257 A130_contig_1257_540 682640 683926 + GT4
pfam A130_contig_1257 A130_contig_1257_541 683940 684920 + C5-epim_C
peptidase A130_contig_1257 A130_contig_1257_542 684968 686896 + C44.UNW
CAZyme A130_contig_1257 A130_contig_1257_543 687063 688103 + GT2
pfam A130_contig_1257 A130_contig_1257_544 688112 689188 + Epimerase_2
CAZyme A130_contig_1257 A130_contig_1257_545 689170 690333 - GT4
NULL(UNKNOWN) A130_contig_1257 A130_contig_1257_546 690371 691825 - NULL(UNKNOWN)
[View Structural Homologs]
pfam A130_contig_1257 A130_contig_1257_547 691883 693388 - Polysacc_synt | Polysacc_synt_3
CAZyme A130_contig_1257 A130_contig_1257_548 693405 694532 - GT4
TC A130_contig_1257 A130_contig_1257_549 694644 697118 + 9.B.144.1.4
Gene ID: A130_contig_1257_540
Type: CAZyme
Location: 682640 - 683926 (+)
Gene ID: A130_contig_1257_541
Type: pfam
Location: 683940 - 684920 (+)
Gene ID: A130_contig_1257_542
Type: peptidase
Location: 684968 - 686896 (+)
Gene ID: A130_contig_1257_543
Type: CAZyme
Location: 687063 - 688103 (+)
Gene ID: A130_contig_1257_544
Type: pfam
Location: 688112 - 689188 (+)
Gene ID: A130_contig_1257_545
Type: CAZyme
Location: 689170 - 690333 (-)
Gene ID: A130_contig_1257_546
Type:
Location: 690371 - 691825 (-)
Gene ID: A130_contig_1257_547
Type: pfam
Location: 691883 - 693388 (-)
Gene ID: A130_contig_1257_548
Type: CAZyme
Location: 693405 - 694532 (-)
Gene ID: A130_contig_1257_549
Type: TC
Location: 694644 - 697118 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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