Cluster: A130.bin_2_CGC13
🧬 Cluster Details
- Gene Count: 10
- CAZyme Count: 3
- Substrate:
- Genome ID: A130.bin_2
- CGC Family ID: CGCFAM_00003
- Continent: Asia
- Source Study: Jin et al., 2023 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | A130_contig_1257 | A130_contig_1257_2399 | 3012190 | 3014136 | + | 9.B.18.2.1 |
| pfam | A130_contig_1257 | A130_contig_1257_2400 | 3014194 | 3015048 | + | 3Beta_HSD | Epimerase | Polysacc_synt_2 | RmlD_sub_bind | NAD_binding_4 | GDP_Man_Dehyd |
| TC | A130_contig_1257 | A130_contig_1257_2401 | 3015087 | 3016697 | + | 3.A.1.121.4 |
| pfam | A130_contig_1257 | A130_contig_1257_2402 | 3016804 | 3017736 | + | 3Beta_HSD | Epimerase | NAD_binding_4 | GDP_Man_Dehyd |
| CAZyme | A130_contig_1257 | A130_contig_1257_2403 | 3017740 | 3018918 | - | GT2 |
| pfam | A130_contig_1257 | A130_contig_1257_2404 | 3018924 | 3020000 | - | Exo_endo_phos |
| pfam | A130_contig_1257 | A130_contig_1257_2405 | 3020008 | 3021099 | - | Exo_endo_phos |
| CAZyme | A130_contig_1257 | A130_contig_1257_2406 | 3021087 | 3022295 | - | GT4 |
| TC | A130_contig_1257 | A130_contig_1257_2407 | 3022292 | 3023731 | - | 2.A.66.2.23 |
| CAZyme | A130_contig_1257 | A130_contig_1257_2408 | 3023736 | 3024665 | - | GT2 |
Gene ID: A130_contig_1257_2399
Type: TC
Location: 3012190 - 3014136 (+)
Type: TC
Location: 3012190 - 3014136 (+)
Gene ID: A130_contig_1257_2400
Type: pfam
Location: 3014194 - 3015048 (+)
Type: pfam
Location: 3014194 - 3015048 (+)
Gene ID: A130_contig_1257_2401
Type: TC
Location: 3015087 - 3016697 (+)
Type: TC
Location: 3015087 - 3016697 (+)
Gene ID: A130_contig_1257_2402
Type: pfam
Location: 3016804 - 3017736 (+)
Type: pfam
Location: 3016804 - 3017736 (+)
Gene ID: A130_contig_1257_2403
Type: CAZyme
Location: 3017740 - 3018918 (-)
Type: CAZyme
Location: 3017740 - 3018918 (-)
Gene ID: A130_contig_1257_2404
Type: pfam
Location: 3018924 - 3020000 (-)
Type: pfam
Location: 3018924 - 3020000 (-)
Gene ID: A130_contig_1257_2405
Type: pfam
Location: 3020008 - 3021099 (-)
Type: pfam
Location: 3020008 - 3021099 (-)
Gene ID: A130_contig_1257_2406
Type: CAZyme
Location: 3021087 - 3022295 (-)
Type: CAZyme
Location: 3021087 - 3022295 (-)
Gene ID: A130_contig_1257_2407
Type: TC
Location: 3022292 - 3023731 (-)
Type: TC
Location: 3022292 - 3023731 (-)
Gene ID: A130_contig_1257_2408
Type: CAZyme
Location: 3023736 - 3024665 (-)
Type: CAZyme
Location: 3023736 - 3024665 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Marinifilaceae
Genus
Butyricimonas
Species
Butyricimonas paravirosa
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.