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Cluster: A130.bin_20_CGC9

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
CAZyme A130_contig_315_corr_2_np12 A130_contig_315_corr_2_np12_618 648722 650047 - GH4
TC A130_contig_315_corr_2_np12 A130_contig_315_corr_2_np12_619 650379 650681 + 4.A.3.2.8
TC A130_contig_315_corr_2_np12 A130_contig_315_corr_2_np12_620 650715 652109 + 4.A.3.2.4
TC A130_contig_315_corr_2_np12 A130_contig_315_corr_2_np12_621 652190 652504 + 4.A.3.2.8
NULL(UNKNOWN) A130_contig_315_corr_2_np12 A130_contig_315_corr_2_np12_622 652521 652712 + NULL(UNKNOWN)
[View Structural Homologs]
pfam A130_contig_315_corr_2_np12 A130_contig_315_corr_2_np12_623 652730 653179 + DUF3284
CAZyme A130_contig_315_corr_2_np12 A130_contig_315_corr_2_np12_624 653184 654293 + GH170
Gene ID: A130_contig_315_corr_2_np12_618
Type: CAZyme
Location: 648722 - 650047 (-)
Gene ID: A130_contig_315_corr_2_np12_619
Type: TC
Location: 650379 - 650681 (+)
Gene ID: A130_contig_315_corr_2_np12_620
Type: TC
Location: 650715 - 652109 (+)
Gene ID: A130_contig_315_corr_2_np12_621
Type: TC
Location: 652190 - 652504 (+)
Gene ID: A130_contig_315_corr_2_np12_622
Type:
Location: 652521 - 652712 (+)
Gene ID: A130_contig_315_corr_2_np12_623
Type: pfam
Location: 652730 - 653179 (+)
Gene ID: A130_contig_315_corr_2_np12_624
Type: CAZyme
Location: 653184 - 654293 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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