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Cluster: A130.bin_20_CGC6

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC A130_contig_315_corr_2_np12 A130_contig_315_corr_2_np12_556 574588 576357 - 8.A.59.2.1
TC A130_contig_315_corr_2_np12 A130_contig_315_corr_2_np12_557 576580 578217 + 3.A.1.1.10
TC A130_contig_315_corr_2_np12 A130_contig_315_corr_2_np12_558 578229 579116 + 3.A.1.1.9
TC A130_contig_315_corr_2_np12 A130_contig_315_corr_2_np12_559 579127 580017 + 3.A.1.1.9
CAZyme A130_contig_315_corr_2_np12 A130_contig_315_corr_2_np12_560 580039 581736 + GH110
CAZyme A130_contig_315_corr_2_np12 A130_contig_315_corr_2_np12_561 581733 582941 + GH109
TC A130_contig_315_corr_2_np12 A130_contig_315_corr_2_np12_562 583130 585244 + 5.A.3.5.1
Gene ID: A130_contig_315_corr_2_np12_556
Type: TC
Location: 574588 - 576357 (-)
Gene ID: A130_contig_315_corr_2_np12_557
Type: TC
Location: 576580 - 578217 (+)
Gene ID: A130_contig_315_corr_2_np12_558
Type: TC
Location: 578229 - 579116 (+)
Gene ID: A130_contig_315_corr_2_np12_559
Type: TC
Location: 579127 - 580017 (+)
Gene ID: A130_contig_315_corr_2_np12_560
Type: CAZyme
Location: 580039 - 581736 (+)
Gene ID: A130_contig_315_corr_2_np12_561
Type: CAZyme
Location: 581733 - 582941 (+)
Gene ID: A130_contig_315_corr_2_np12_562
Type: TC
Location: 583130 - 585244 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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