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Cluster: A130.bin_20_CGC5

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC A130_contig_315_corr_2_np12 A130_contig_315_corr_2_np12_374 388671 389345 + 3.A.1.125.3
pfam A130_contig_315_corr_2_np12 A130_contig_315_corr_2_np12_375 389342 391756 + FtsX | FtsX
TC A130_contig_315_corr_2_np12 A130_contig_315_corr_2_np12_376 391914 393275 + 2.A.66.1.34
pfam A130_contig_315_corr_2_np12 A130_contig_315_corr_2_np12_377 393434 394075 - PepSY | PepSY
TF A130_contig_315_corr_2_np12 A130_contig_315_corr_2_np12_378 394213 395103 - HTH_AraC | HTH_AraC
TC A130_contig_315_corr_2_np12 A130_contig_315_corr_2_np12_379 395300 396574 + 3.A.1.1.34
TC A130_contig_315_corr_2_np12 A130_contig_315_corr_2_np12_380 396648 397532 + 3.A.1.1.34
TC A130_contig_315_corr_2_np12 A130_contig_315_corr_2_np12_381 397545 398375 + 3.A.1.1.39
CAZyme A130_contig_315_corr_2_np12 A130_contig_315_corr_2_np12_382 398397 400265 + GH127
Gene ID: A130_contig_315_corr_2_np12_374
Type: TC
Location: 388671 - 389345 (+)
Gene ID: A130_contig_315_corr_2_np12_375
Type: pfam
Location: 389342 - 391756 (+)
Gene ID: A130_contig_315_corr_2_np12_376
Type: TC
Location: 391914 - 393275 (+)
Gene ID: A130_contig_315_corr_2_np12_377
Type: pfam
Location: 393434 - 394075 (-)
Gene ID: A130_contig_315_corr_2_np12_378
Type: TF
Location: 394213 - 395103 (-)
Gene ID: A130_contig_315_corr_2_np12_379
Type: TC
Location: 395300 - 396574 (+)
Gene ID: A130_contig_315_corr_2_np12_380
Type: TC
Location: 396648 - 397532 (+)
Gene ID: A130_contig_315_corr_2_np12_381
Type: TC
Location: 397545 - 398375 (+)
Gene ID: A130_contig_315_corr_2_np12_382
Type: CAZyme
Location: 398397 - 400265 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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