Cluster: A130.bin_20_CGC4
🧬 Cluster Details
- Gene Count: 5
- CAZyme Count: 1
- Substrate:
- Genome ID: A130.bin_20
- CGC Family ID: CGCFAM_04297
- Continent: Asia
- Source Study: Jin et al., 2023 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | A130_contig_315_corr_2_np12 | A130_contig_315_corr_2_np12_330 | 347340 | 348203 | - | 3.A.1.149.1 |
| TF | A130_contig_315_corr_2_np12 | A130_contig_315_corr_2_np12_331 | 348207 | 348650 | - | GntR |
| pfam | A130_contig_315_corr_2_np12 | A130_contig_315_corr_2_np12_332 | 348653 | 349384 | - | ABC2_membrane | ABC2_membrane_3 |
| TC | A130_contig_315_corr_2_np12 | A130_contig_315_corr_2_np12_333 | 349381 | 350232 | - | 3.A.1.144.1 |
| CAZyme | A130_contig_315_corr_2_np12 | A130_contig_315_corr_2_np12_334 | 350409 | 352418 | + | GH31_1 |
Gene ID: A130_contig_315_corr_2_np12_330
Type: TC
Location: 347340 - 348203 (-)
Type: TC
Location: 347340 - 348203 (-)
Gene ID: A130_contig_315_corr_2_np12_331
Type: TF
Location: 348207 - 348650 (-)
Type: TF
Location: 348207 - 348650 (-)
Gene ID: A130_contig_315_corr_2_np12_332
Type: pfam
Location: 348653 - 349384 (-)
Type: pfam
Location: 348653 - 349384 (-)
Gene ID: A130_contig_315_corr_2_np12_333
Type: TC
Location: 349381 - 350232 (-)
Type: TC
Location: 349381 - 350232 (-)
Gene ID: A130_contig_315_corr_2_np12_334
Type: CAZyme
Location: 350409 - 352418 (+)
Type: CAZyme
Location: 350409 - 352418 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Lachnospirales
Family
Lachnospiraceae
Genus
Sellimonas
Species
Sellimonas intestinalis
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.