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Cluster: A130.bin_20_CGC33

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC A130_contig_315_corr_2_np12 A130_contig_315_corr_2_np12_2872 2983310 2986447 - 9.B.74.1.1
pfam A130_contig_315_corr_2_np12 A130_contig_315_corr_2_np12_2873 2986656 2987234 + TetR_C_8
pfam A130_contig_315_corr_2_np12 A130_contig_315_corr_2_np12_2874 2987250 2987510 - DUF6198
TC A130_contig_315_corr_2_np12 A130_contig_315_corr_2_np12_2875 2987559 2987885 - 2.A.115.2.10
TF A130_contig_315_corr_2_np12 A130_contig_315_corr_2_np12_2876 2987866 2988318 - MarR
CAZyme A130_contig_315_corr_2_np12 A130_contig_315_corr_2_np12_2877 2988478 2990448 - GH127
pfam A130_contig_315_corr_2_np12 A130_contig_315_corr_2_np12_2878 2990453 2993020 - DUF5695
TC A130_contig_315_corr_2_np12 A130_contig_315_corr_2_np12_2879 2993044 2993877 - 3.A.1.1.41
TC A130_contig_315_corr_2_np12 A130_contig_315_corr_2_np12_2880 2993880 2994773 - 3.A.1.1.17
TC A130_contig_315_corr_2_np12 A130_contig_315_corr_2_np12_2881 2994811 2996115 - 3.A.1.1.41
TF A130_contig_315_corr_2_np12 A130_contig_315_corr_2_np12_2882 2996241 2997224 - LacI
CAZyme A130_contig_315_corr_2_np12 A130_contig_315_corr_2_np12_2883 2997343 2999469 - GH182
pfam A130_contig_315_corr_2_np12 A130_contig_315_corr_2_np12_2884 2999594 3000751 - MFS_1 | MFS_1
CAZyme A130_contig_315_corr_2_np12 A130_contig_315_corr_2_np12_2885 3000943 3002631 - GH123
TC A130_contig_315_corr_2_np12 A130_contig_315_corr_2_np12_2886 3002655 3003476 - 3.A.1.1.39
TC A130_contig_315_corr_2_np12 A130_contig_315_corr_2_np12_2887 3003494 3004375 - 3.A.1.1.20
Gene ID: A130_contig_315_corr_2_np12_2872
Type: TC
Location: 2983310 - 2986447 (-)
Gene ID: A130_contig_315_corr_2_np12_2873
Type: pfam
Location: 2986656 - 2987234 (+)
Gene ID: A130_contig_315_corr_2_np12_2874
Type: pfam
Location: 2987250 - 2987510 (-)
Gene ID: A130_contig_315_corr_2_np12_2875
Type: TC
Location: 2987559 - 2987885 (-)
Gene ID: A130_contig_315_corr_2_np12_2876
Type: TF
Location: 2987866 - 2988318 (-)
Gene ID: A130_contig_315_corr_2_np12_2877
Type: CAZyme
Location: 2988478 - 2990448 (-)
Gene ID: A130_contig_315_corr_2_np12_2878
Type: pfam
Location: 2990453 - 2993020 (-)
Gene ID: A130_contig_315_corr_2_np12_2879
Type: TC
Location: 2993044 - 2993877 (-)
Gene ID: A130_contig_315_corr_2_np12_2880
Type: TC
Location: 2993880 - 2994773 (-)
Gene ID: A130_contig_315_corr_2_np12_2881
Type: TC
Location: 2994811 - 2996115 (-)
Gene ID: A130_contig_315_corr_2_np12_2882
Type: TF
Location: 2996241 - 2997224 (-)
Gene ID: A130_contig_315_corr_2_np12_2883
Type: CAZyme
Location: 2997343 - 2999469 (-)
Gene ID: A130_contig_315_corr_2_np12_2884
Type: pfam
Location: 2999594 - 3000751 (-)
Gene ID: A130_contig_315_corr_2_np12_2885
Type: CAZyme
Location: 3000943 - 3002631 (-)
Gene ID: A130_contig_315_corr_2_np12_2886
Type: TC
Location: 3002655 - 3003476 (-)
Gene ID: A130_contig_315_corr_2_np12_2887
Type: TC
Location: 3003494 - 3004375 (-)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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