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Cluster: A130.bin_20_CGC32

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC A130_contig_315_corr_2_np12 A130_contig_315_corr_2_np12_2811 2920775 2921752 - 2.A.10.1.3
STP A130_contig_315_corr_2_np12 A130_contig_315_corr_2_np12_2812 2922209 2923210 - Sigma70_r4_2
pfam A130_contig_315_corr_2_np12 A130_contig_315_corr_2_np12_2813 2923462 2924802 + RuBisCO_large | RuBisCO_large_N
CAZyme A130_contig_315_corr_2_np12 A130_contig_315_corr_2_np12_2814 2924880 2926751 - GH20
TC A130_contig_315_corr_2_np12 A130_contig_315_corr_2_np12_2815 2926764 2927603 - 3.A.1.1.39
TC A130_contig_315_corr_2_np12 A130_contig_315_corr_2_np12_2816 2927611 2928474 - 3.A.1.1.11
Gene ID: A130_contig_315_corr_2_np12_2811
Type: TC
Location: 2920775 - 2921752 (-)
Gene ID: A130_contig_315_corr_2_np12_2812
Type: STP
Location: 2922209 - 2923210 (-)
Gene ID: A130_contig_315_corr_2_np12_2813
Type: pfam
Location: 2923462 - 2924802 (+)
Gene ID: A130_contig_315_corr_2_np12_2814
Type: CAZyme
Location: 2924880 - 2926751 (-)
Gene ID: A130_contig_315_corr_2_np12_2815
Type: TC
Location: 2926764 - 2927603 (-)
Gene ID: A130_contig_315_corr_2_np12_2816
Type: TC
Location: 2927611 - 2928474 (-)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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