Cluster: A130.bin_20_CGC31
🧬 Cluster Details
- Gene Count: 11
- CAZyme Count: 2
- Substrate:
- Genome ID: A130.bin_20
- CGC Family ID: CGCFAM_04296
- Continent: Asia
- Source Study: Jin et al., 2023 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | A130_contig_315_corr_2_np12 | A130_contig_315_corr_2_np12_2740 | 2838476 | 2840767 | - | 3.A.3.23.2 |
| STP | A130_contig_315_corr_2_np12 | A130_contig_315_corr_2_np12_2741 | 2841033 | 2841767 | - | AraC_binding |
| NULL(UNKNOWN) | A130_contig_315_corr_2_np12 | A130_contig_315_corr_2_np12_2742 | 2842116 | 2842826 | + |
NULL(UNKNOWN)
[View Structural Homologs] |
| TC | A130_contig_315_corr_2_np12 | A130_contig_315_corr_2_np12_2743 | 2842875 | 2844170 | + | 3.A.1.1.44 |
| TC | A130_contig_315_corr_2_np12 | A130_contig_315_corr_2_np12_2744 | 2844186 | 2845109 | + | 3.A.1.1.11 |
| TC | A130_contig_315_corr_2_np12 | A130_contig_315_corr_2_np12_2745 | 2845128 | 2845955 | + | 3.A.1.1.36 |
| TC | A130_contig_315_corr_2_np12 | A130_contig_315_corr_2_np12_2746 | 2846205 | 2847032 | - | 3.A.1.1.36 |
| TC | A130_contig_315_corr_2_np12 | A130_contig_315_corr_2_np12_2747 | 2847047 | 2847970 | - | 3.A.1.1.11 |
| STP | A130_contig_315_corr_2_np12 | A130_contig_315_corr_2_np12_2748 | 2847989 | 2849254 | - | SBP_bac_1 |
| CAZyme | A130_contig_315_corr_2_np12 | A130_contig_315_corr_2_np12_2749 | 2849303 | 2850592 | - | GH177 |
| CAZyme | A130_contig_315_corr_2_np12 | A130_contig_315_corr_2_np12_2750 | 2850830 | 2852713 | - | GH129 |
Gene ID: A130_contig_315_corr_2_np12_2740
Type: TC
Location: 2838476 - 2840767 (-)
Type: TC
Location: 2838476 - 2840767 (-)
Gene ID: A130_contig_315_corr_2_np12_2741
Type: STP
Location: 2841033 - 2841767 (-)
Type: STP
Location: 2841033 - 2841767 (-)
Gene ID: A130_contig_315_corr_2_np12_2742
Type:
Location: 2842116 - 2842826 (+)
Type:
Location: 2842116 - 2842826 (+)
Gene ID: A130_contig_315_corr_2_np12_2743
Type: TC
Location: 2842875 - 2844170 (+)
Type: TC
Location: 2842875 - 2844170 (+)
Gene ID: A130_contig_315_corr_2_np12_2744
Type: TC
Location: 2844186 - 2845109 (+)
Type: TC
Location: 2844186 - 2845109 (+)
Gene ID: A130_contig_315_corr_2_np12_2745
Type: TC
Location: 2845128 - 2845955 (+)
Type: TC
Location: 2845128 - 2845955 (+)
Gene ID: A130_contig_315_corr_2_np12_2746
Type: TC
Location: 2846205 - 2847032 (-)
Type: TC
Location: 2846205 - 2847032 (-)
Gene ID: A130_contig_315_corr_2_np12_2747
Type: TC
Location: 2847047 - 2847970 (-)
Type: TC
Location: 2847047 - 2847970 (-)
Gene ID: A130_contig_315_corr_2_np12_2748
Type: STP
Location: 2847989 - 2849254 (-)
Type: STP
Location: 2847989 - 2849254 (-)
Gene ID: A130_contig_315_corr_2_np12_2749
Type: CAZyme
Location: 2849303 - 2850592 (-)
Type: CAZyme
Location: 2849303 - 2850592 (-)
Gene ID: A130_contig_315_corr_2_np12_2750
Type: CAZyme
Location: 2850830 - 2852713 (-)
Type: CAZyme
Location: 2850830 - 2852713 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Lachnospirales
Family
Lachnospiraceae
Genus
Sellimonas
Species
Sellimonas intestinalis
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.