Cluster: A130.bin_20_CGC29
🧬 Cluster Details
- Gene Count: 9
- CAZyme Count: 1
- Substrate:
- Genome ID: A130.bin_20
- CGC Family ID: CGCFAM_06623
- Continent: Asia
- Source Study: Jin et al., 2023 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | A130_contig_315_corr_2_np12 | A130_contig_315_corr_2_np12_2515 | 2600065 | 2600931 | - | 3.A.1.132.1 |
| TC | A130_contig_315_corr_2_np12 | A130_contig_315_corr_2_np12_2516 | 2600915 | 2601871 | - | 3.A.1.132.9 |
| pfam | A130_contig_315_corr_2_np12 | A130_contig_315_corr_2_np12_2517 | 2602030 | 2602707 | + | Hexapep | Mac | Hexapep_2 |
| STP | A130_contig_315_corr_2_np12 | A130_contig_315_corr_2_np12_2518 | 2602816 | 2603742 | - | PfkB |
| CAZyme | A130_contig_315_corr_2_np12 | A130_contig_315_corr_2_np12_2519 | 2603758 | 2605449 | - | GH2 |
| TF | A130_contig_315_corr_2_np12 | A130_contig_315_corr_2_np12_2520 | 2605446 | 2605883 | - | MarR |
| TC | A130_contig_315_corr_2_np12 | A130_contig_315_corr_2_np12_2521 | 2605890 | 2607743 | - | 3.A.1.135.5 |
| TC | A130_contig_315_corr_2_np12 | A130_contig_315_corr_2_np12_2522 | 2607743 | 2609446 | - | 3.A.1.135.5 |
| TC | A130_contig_315_corr_2_np12 | A130_contig_315_corr_2_np12_2523 | 2609619 | 2610230 | - | 9.B.27.2.5 |
Gene ID: A130_contig_315_corr_2_np12_2515
Type: TC
Location: 2600065 - 2600931 (-)
Type: TC
Location: 2600065 - 2600931 (-)
Gene ID: A130_contig_315_corr_2_np12_2516
Type: TC
Location: 2600915 - 2601871 (-)
Type: TC
Location: 2600915 - 2601871 (-)
Gene ID: A130_contig_315_corr_2_np12_2517
Type: pfam
Location: 2602030 - 2602707 (+)
Type: pfam
Location: 2602030 - 2602707 (+)
Gene ID: A130_contig_315_corr_2_np12_2518
Type: STP
Location: 2602816 - 2603742 (-)
Type: STP
Location: 2602816 - 2603742 (-)
Gene ID: A130_contig_315_corr_2_np12_2519
Type: CAZyme
Location: 2603758 - 2605449 (-)
Type: CAZyme
Location: 2603758 - 2605449 (-)
Gene ID: A130_contig_315_corr_2_np12_2520
Type: TF
Location: 2605446 - 2605883 (-)
Type: TF
Location: 2605446 - 2605883 (-)
Gene ID: A130_contig_315_corr_2_np12_2521
Type: TC
Location: 2605890 - 2607743 (-)
Type: TC
Location: 2605890 - 2607743 (-)
Gene ID: A130_contig_315_corr_2_np12_2522
Type: TC
Location: 2607743 - 2609446 (-)
Type: TC
Location: 2607743 - 2609446 (-)
Gene ID: A130_contig_315_corr_2_np12_2523
Type: TC
Location: 2609619 - 2610230 (-)
Type: TC
Location: 2609619 - 2610230 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Lachnospirales
Family
Lachnospiraceae
Genus
Sellimonas
Species
Sellimonas intestinalis
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.