Cluster: A130.bin_20_CGC24
🧬 Cluster Details
- Gene Count: 10
- CAZyme Count: 3
- Substrate:
- Genome ID: A130.bin_20
- CGC Family ID: CGCFAM_06418
- Continent: Asia
- Source Study: Jin et al., 2023 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | A130_contig_315_corr_2_np12 | A130_contig_315_corr_2_np12_2312 | 2383346 | 2385376 | + | GH13_20 |
| CAZyme | A130_contig_315_corr_2_np12 | A130_contig_315_corr_2_np12_2313 | 2385457 | 2387121 | - | GH13_29 |
| TC | A130_contig_315_corr_2_np12 | A130_contig_315_corr_2_np12_2314 | 2387155 | 2389122 | - | 4.A.1.2.13 |
| TF | A130_contig_315_corr_2_np12 | A130_contig_315_corr_2_np12_2315 | 2389292 | 2390017 | + | GntR |
| CAZyme | A130_contig_315_corr_2_np12 | A130_contig_315_corr_2_np12_2316 | 2390068 | 2391498 | - | CE4 |
| TF | A130_contig_315_corr_2_np12 | A130_contig_315_corr_2_np12_2317 | 2391842 | 2392765 | + | HTH_AraC | HTH_AraC |
| STP | A130_contig_315_corr_2_np12 | A130_contig_315_corr_2_np12_2318 | 2392858 | 2393478 | + | NUDIX |
| TC | A130_contig_315_corr_2_np12 | A130_contig_315_corr_2_np12_2319 | 2393497 | 2394246 | - | 3.A.1.17.13 |
| TC | A130_contig_315_corr_2_np12 | A130_contig_315_corr_2_np12_2320 | 2394259 | 2395260 | - | 3.A.1.17.8 |
| TC | A130_contig_315_corr_2_np12 | A130_contig_315_corr_2_np12_2321 | 2395257 | 2396048 | - | 3.A.1.17.8 |
Gene ID: A130_contig_315_corr_2_np12_2312
Type: CAZyme
Location: 2383346 - 2385376 (+)
Type: CAZyme
Location: 2383346 - 2385376 (+)
Gene ID: A130_contig_315_corr_2_np12_2313
Type: CAZyme
Location: 2385457 - 2387121 (-)
Type: CAZyme
Location: 2385457 - 2387121 (-)
Gene ID: A130_contig_315_corr_2_np12_2314
Type: TC
Location: 2387155 - 2389122 (-)
Type: TC
Location: 2387155 - 2389122 (-)
Gene ID: A130_contig_315_corr_2_np12_2315
Type: TF
Location: 2389292 - 2390017 (+)
Type: TF
Location: 2389292 - 2390017 (+)
Gene ID: A130_contig_315_corr_2_np12_2316
Type: CAZyme
Location: 2390068 - 2391498 (-)
Type: CAZyme
Location: 2390068 - 2391498 (-)
Gene ID: A130_contig_315_corr_2_np12_2317
Type: TF
Location: 2391842 - 2392765 (+)
Type: TF
Location: 2391842 - 2392765 (+)
Gene ID: A130_contig_315_corr_2_np12_2318
Type: STP
Location: 2392858 - 2393478 (+)
Type: STP
Location: 2392858 - 2393478 (+)
Gene ID: A130_contig_315_corr_2_np12_2319
Type: TC
Location: 2393497 - 2394246 (-)
Type: TC
Location: 2393497 - 2394246 (-)
Gene ID: A130_contig_315_corr_2_np12_2320
Type: TC
Location: 2394259 - 2395260 (-)
Type: TC
Location: 2394259 - 2395260 (-)
Gene ID: A130_contig_315_corr_2_np12_2321
Type: TC
Location: 2395257 - 2396048 (-)
Type: TC
Location: 2395257 - 2396048 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Lachnospirales
Family
Lachnospiraceae
Genus
Sellimonas
Species
Sellimonas intestinalis
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.