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Cluster: A130.bin_20_CGC23

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC A130_contig_315_corr_2_np12 A130_contig_315_corr_2_np12_2270 2334081 2335439 + 2.A.66.1.26
STP A130_contig_315_corr_2_np12 A130_contig_315_corr_2_np12_2271 2335436 2336023 - HD
sulfatase A130_contig_315_corr_2_np12 A130_contig_315_corr_2_np12_2272 2336199 2336945 + S1_2
CAZyme A130_contig_315_corr_2_np12 A130_contig_315_corr_2_np12_2273 2337031 2338872 - GH13_4
CAZyme A130_contig_315_corr_2_np12 A130_contig_315_corr_2_np12_2274 2338889 2341075 - GH36
TC A130_contig_315_corr_2_np12 A130_contig_315_corr_2_np12_2275 2341099 2341941 - 3.A.1.1.28
TC A130_contig_315_corr_2_np12 A130_contig_315_corr_2_np12_2276 2341941 2342813 - 3.A.1.1.28
TC A130_contig_315_corr_2_np12 A130_contig_315_corr_2_np12_2277 2342838 2344127 - 3.A.1.1.28
Gene ID: A130_contig_315_corr_2_np12_2270
Type: TC
Location: 2334081 - 2335439 (+)
Gene ID: A130_contig_315_corr_2_np12_2271
Type: STP
Location: 2335436 - 2336023 (-)
Gene ID: A130_contig_315_corr_2_np12_2272
Type: sulfatase
Location: 2336199 - 2336945 (+)
Gene ID: A130_contig_315_corr_2_np12_2273
Type: CAZyme
Location: 2337031 - 2338872 (-)
Gene ID: A130_contig_315_corr_2_np12_2274
Type: CAZyme
Location: 2338889 - 2341075 (-)
Gene ID: A130_contig_315_corr_2_np12_2275
Type: TC
Location: 2341099 - 2341941 (-)
Gene ID: A130_contig_315_corr_2_np12_2276
Type: TC
Location: 2341941 - 2342813 (-)
Gene ID: A130_contig_315_corr_2_np12_2277
Type: TC
Location: 2342838 - 2344127 (-)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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