Cluster: A130.bin_20_CGC21
🧬 Cluster Details
- Gene Count: 7
- CAZyme Count: 3
- Substrate:
- Genome ID: A130.bin_20
- CGC Family ID: CGCFAM_00003
- Continent: Asia
- Source Study: Jin et al., 2023 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | A130_contig_315_corr_2_np12 | A130_contig_315_corr_2_np12_2181 | 2248740 | 2249783 | - | GT4 |
| pfam | A130_contig_315_corr_2_np12 | A130_contig_315_corr_2_np12_2182 | 2249798 | 2250946 | - | EpsG |
| CAZyme | A130_contig_315_corr_2_np12 | A130_contig_315_corr_2_np12_2183 | 2250983 | 2251984 | - | GT2 |
| pfam | A130_contig_315_corr_2_np12 | A130_contig_315_corr_2_np12_2184 | 2252034 | 2252957 | - | ATPgrasp_TupA |
| CAZyme | A130_contig_315_corr_2_np12 | A130_contig_315_corr_2_np12_2185 | 2252950 | 2254038 | - | GT4 |
| pfam | A130_contig_315_corr_2_np12 | A130_contig_315_corr_2_np12_2186 | 2254038 | 2255099 | - | 3Beta_HSD | Epimerase | RmlD_sub_bind | NAD_binding_4 | GDP_Man_Dehyd |
| TC | A130_contig_315_corr_2_np12 | A130_contig_315_corr_2_np12_2187 | 2255120 | 2255737 | - | 9.B.18.1.3 |
Gene ID: A130_contig_315_corr_2_np12_2181
Type: CAZyme
Location: 2248740 - 2249783 (-)
Type: CAZyme
Location: 2248740 - 2249783 (-)
Gene ID: A130_contig_315_corr_2_np12_2182
Type: pfam
Location: 2249798 - 2250946 (-)
Type: pfam
Location: 2249798 - 2250946 (-)
Gene ID: A130_contig_315_corr_2_np12_2183
Type: CAZyme
Location: 2250983 - 2251984 (-)
Type: CAZyme
Location: 2250983 - 2251984 (-)
Gene ID: A130_contig_315_corr_2_np12_2184
Type: pfam
Location: 2252034 - 2252957 (-)
Type: pfam
Location: 2252034 - 2252957 (-)
Gene ID: A130_contig_315_corr_2_np12_2185
Type: CAZyme
Location: 2252950 - 2254038 (-)
Type: CAZyme
Location: 2252950 - 2254038 (-)
Gene ID: A130_contig_315_corr_2_np12_2186
Type: pfam
Location: 2254038 - 2255099 (-)
Type: pfam
Location: 2254038 - 2255099 (-)
Gene ID: A130_contig_315_corr_2_np12_2187
Type: TC
Location: 2255120 - 2255737 (-)
Type: TC
Location: 2255120 - 2255737 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Lachnospirales
Family
Lachnospiraceae
Genus
Sellimonas
Species
Sellimonas intestinalis
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.