Cluster: A130.bin_20_CGC17
🧬 Cluster Details
- Gene Count: 10
- CAZyme Count: 1
- Substrate:
- Genome ID: A130.bin_20
- CGC Family ID: CGCFAM_06618
- Continent: Asia
- Source Study: Jin et al., 2023 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | A130_contig_315_corr_2_np12 | A130_contig_315_corr_2_np12_1455 | 1529777 | 1530568 | - | CE1 |
| STP | A130_contig_315_corr_2_np12 | A130_contig_315_corr_2_np12_1456 | 1530674 | 1533256 | - | NIR_SIR | NIR_SIR_ferr | Pyr_redox_2 |
| NULL(UNKNOWN) | A130_contig_315_corr_2_np12 | A130_contig_315_corr_2_np12_1457 | 1533376 | 1534134 | - |
NULL(UNKNOWN)
[View Structural Homologs] |
| TC | A130_contig_315_corr_2_np12 | A130_contig_315_corr_2_np12_1458 | 1534147 | 1534833 | - | 3.A.1.132.6 |
| TF | A130_contig_315_corr_2_np12 | A130_contig_315_corr_2_np12_1459 | 1534830 | 1535195 | - | GntR |
| TC | A130_contig_315_corr_2_np12 | A130_contig_315_corr_2_np12_1460 | 1535475 | 1536818 | - | 2.A.66.1.33 |
| NULL(UNKNOWN) | A130_contig_315_corr_2_np12 | A130_contig_315_corr_2_np12_1461 | 1536820 | 1537860 | - |
NULL(UNKNOWN)
[View Structural Homologs] |
| NULL(UNKNOWN) | A130_contig_315_corr_2_np12 | A130_contig_315_corr_2_np12_1462 | 1537870 | 1539165 | - |
NULL(UNKNOWN)
[View Structural Homologs] |
| TC | A130_contig_315_corr_2_np12 | A130_contig_315_corr_2_np12_1463 | 1539245 | 1540348 | - | 3.A.1.14.8 |
| TC | A130_contig_315_corr_2_np12 | A130_contig_315_corr_2_np12_1464 | 1540354 | 1541370 | - | 3.A.1.13.2 |
Gene ID: A130_contig_315_corr_2_np12_1455
Type: CAZyme
Location: 1529777 - 1530568 (-)
Type: CAZyme
Location: 1529777 - 1530568 (-)
Gene ID: A130_contig_315_corr_2_np12_1456
Type: STP
Location: 1530674 - 1533256 (-)
Type: STP
Location: 1530674 - 1533256 (-)
Gene ID: A130_contig_315_corr_2_np12_1457
Type:
Location: 1533376 - 1534134 (-)
Type:
Location: 1533376 - 1534134 (-)
Gene ID: A130_contig_315_corr_2_np12_1458
Type: TC
Location: 1534147 - 1534833 (-)
Type: TC
Location: 1534147 - 1534833 (-)
Gene ID: A130_contig_315_corr_2_np12_1459
Type: TF
Location: 1534830 - 1535195 (-)
Type: TF
Location: 1534830 - 1535195 (-)
Gene ID: A130_contig_315_corr_2_np12_1460
Type: TC
Location: 1535475 - 1536818 (-)
Type: TC
Location: 1535475 - 1536818 (-)
Gene ID: A130_contig_315_corr_2_np12_1461
Type:
Location: 1536820 - 1537860 (-)
Type:
Location: 1536820 - 1537860 (-)
Gene ID: A130_contig_315_corr_2_np12_1462
Type:
Location: 1537870 - 1539165 (-)
Type:
Location: 1537870 - 1539165 (-)
Gene ID: A130_contig_315_corr_2_np12_1463
Type: TC
Location: 1539245 - 1540348 (-)
Type: TC
Location: 1539245 - 1540348 (-)
Gene ID: A130_contig_315_corr_2_np12_1464
Type: TC
Location: 1540354 - 1541370 (-)
Type: TC
Location: 1540354 - 1541370 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Lachnospirales
Family
Lachnospiraceae
Genus
Sellimonas
Species
Sellimonas intestinalis
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.