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Cluster: A130.bin_20_CGC14

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC A130_contig_315_corr_2_np12 A130_contig_315_corr_2_np12_1081 1162378 1164120 - 8.A.59.2.1
TF A130_contig_315_corr_2_np12 A130_contig_315_corr_2_np12_1082 1164126 1165628 - HTH_AraC
TC A130_contig_315_corr_2_np12 A130_contig_315_corr_2_np12_1083 1165913 1167214 + 3.A.1.1.4
TC A130_contig_315_corr_2_np12 A130_contig_315_corr_2_np12_1084 1167243 1168136 + 3.A.1.1.4
TC A130_contig_315_corr_2_np12 A130_contig_315_corr_2_np12_1085 1168126 1168971 + 3.A.1.1.4
CAZyme A130_contig_315_corr_2_np12 A130_contig_315_corr_2_np12_1086 1168992 1172081 + GH2
Gene ID: A130_contig_315_corr_2_np12_1081
Type: TC
Location: 1162378 - 1164120 (-)
Gene ID: A130_contig_315_corr_2_np12_1082
Type: TF
Location: 1164126 - 1165628 (-)
Gene ID: A130_contig_315_corr_2_np12_1083
Type: TC
Location: 1165913 - 1167214 (+)
Gene ID: A130_contig_315_corr_2_np12_1084
Type: TC
Location: 1167243 - 1168136 (+)
Gene ID: A130_contig_315_corr_2_np12_1085
Type: TC
Location: 1168126 - 1168971 (+)
Gene ID: A130_contig_315_corr_2_np12_1086
Type: CAZyme
Location: 1168992 - 1172081 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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