Cluster: A130.bin_20_CGC13
🧬 Cluster Details
- Gene Count: 5
- CAZyme Count: 1
- Substrate:
- Genome ID: A130.bin_20
- CGC Family ID: CGCFAM_00961
- Continent: Asia
- Source Study: Jin et al., 2023 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | A130_contig_315_corr_2_np12 | A130_contig_315_corr_2_np12_1024 | 1097270 | 1098196 | + | GH25 |
| pfam | A130_contig_315_corr_2_np12 | A130_contig_315_corr_2_np12_1025 | 1098392 | 1098832 | + | ChW | ChW | ChW |
| pfam | A130_contig_315_corr_2_np12 | A130_contig_315_corr_2_np12_1026 | 1098829 | 1100277 | + | ChW | ChW | ChW | ChW | ChW | ChW | ChW | ChW | ChW |
| TC | A130_contig_315_corr_2_np12 | A130_contig_315_corr_2_np12_1027 | 1100368 | 1101177 | - | 3.A.1.17.3 |
| TC | A130_contig_315_corr_2_np12 | A130_contig_315_corr_2_np12_1028 | 1101158 | 1101946 | - | 3.A.1.17.8 |
Gene ID: A130_contig_315_corr_2_np12_1024
Type: CAZyme
Location: 1097270 - 1098196 (+)
Type: CAZyme
Location: 1097270 - 1098196 (+)
Gene ID: A130_contig_315_corr_2_np12_1025
Type: pfam
Location: 1098392 - 1098832 (+)
Type: pfam
Location: 1098392 - 1098832 (+)
Gene ID: A130_contig_315_corr_2_np12_1026
Type: pfam
Location: 1098829 - 1100277 (+)
Type: pfam
Location: 1098829 - 1100277 (+)
Gene ID: A130_contig_315_corr_2_np12_1027
Type: TC
Location: 1100368 - 1101177 (-)
Type: TC
Location: 1100368 - 1101177 (-)
Gene ID: A130_contig_315_corr_2_np12_1028
Type: TC
Location: 1101158 - 1101946 (-)
Type: TC
Location: 1101158 - 1101946 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Lachnospirales
Family
Lachnospiraceae
Genus
Sellimonas
Species
Sellimonas intestinalis
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.