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Cluster: A130.bin_20_CGC12

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC A130_contig_315_corr_2_np12 A130_contig_315_corr_2_np12_779 827535 829700 + 4.A.1.1.9
pfam A130_contig_315_corr_2_np12 A130_contig_315_corr_2_np12_780 829722 830549 + PRD | PRD | CAT_RBD
TC A130_contig_315_corr_2_np12 A130_contig_315_corr_2_np12_781 830645 832201 - 3.A.1.121.4
pfam A130_contig_315_corr_2_np12 A130_contig_315_corr_2_np12_782 832608 833189 + Flavodoxin_2 | FMN_red
TC A130_contig_315_corr_2_np12 A130_contig_315_corr_2_np12_783 833967 835739 + 3.A.1.111.2
TC A130_contig_315_corr_2_np12 A130_contig_315_corr_2_np12_784 835864 837588 + 3.A.1.111.3
STP A130_contig_315_corr_2_np12 A130_contig_315_corr_2_np12_785 838385 838879 + NUDIX
CAZyme A130_contig_315_corr_2_np12 A130_contig_315_corr_2_np12_786 838906 839874 + GH109
Gene ID: A130_contig_315_corr_2_np12_779
Type: TC
Location: 827535 - 829700 (+)
Gene ID: A130_contig_315_corr_2_np12_780
Type: pfam
Location: 829722 - 830549 (+)
Gene ID: A130_contig_315_corr_2_np12_781
Type: TC
Location: 830645 - 832201 (-)
Gene ID: A130_contig_315_corr_2_np12_782
Type: pfam
Location: 832608 - 833189 (+)
Gene ID: A130_contig_315_corr_2_np12_783
Type: TC
Location: 833967 - 835739 (+)
Gene ID: A130_contig_315_corr_2_np12_784
Type: TC
Location: 835864 - 837588 (+)
Gene ID: A130_contig_315_corr_2_np12_785
Type: STP
Location: 838385 - 838879 (+)
Gene ID: A130_contig_315_corr_2_np12_786
Type: CAZyme
Location: 838906 - 839874 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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