Cluster: A130.bin_20_CGC11
🧬 Cluster Details
- Gene Count: 10
- CAZyme Count: 4
- Substrate:
- Genome ID: A130.bin_20
- CGC Family ID: CGCFAM_06615
- Continent: Asia
- Source Study: Jin et al., 2023 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | A130_contig_315_corr_2_np12 | A130_contig_315_corr_2_np12_720 | 763164 | 763427 | + | 8.A.8.1.6 |
| pfam | A130_contig_315_corr_2_np12 | A130_contig_315_corr_2_np12_721 | 763455 | 765116 | + | HMGL-like | LeuA_dimer | IPMS_D2 |
| pfam | A130_contig_315_corr_2_np12 | A130_contig_315_corr_2_np12_722 | 765148 | 766044 | + | NTP_transferase |
| TC | A130_contig_315_corr_2_np12 | A130_contig_315_corr_2_np12_723 | 766317 | 767711 | + | 9.B.18.1.3 |
| pfam | A130_contig_315_corr_2_np12 | A130_contig_315_corr_2_np12_724 | 767715 | 768812 | + | GLF | NAD_binding_8 |
| CAZyme | A130_contig_315_corr_2_np12 | A130_contig_315_corr_2_np12_725 | 768825 | 769889 | + | GT2 |
| CAZyme | A130_contig_315_corr_2_np12 | A130_contig_315_corr_2_np12_726 | 769889 | 770998 | + | GT4 |
| CAZyme | A130_contig_315_corr_2_np12 | A130_contig_315_corr_2_np12_727 | 771001 | 772098 | + | GT4 |
| pfam | A130_contig_315_corr_2_np12 | A130_contig_315_corr_2_np12_728 | 772086 | 772910 | + | LicD |
| CAZyme | A130_contig_315_corr_2_np12 | A130_contig_315_corr_2_np12_729 | 772898 | 773962 | + | GT2 |
Gene ID: A130_contig_315_corr_2_np12_720
Type: TC
Location: 763164 - 763427 (+)
Type: TC
Location: 763164 - 763427 (+)
Gene ID: A130_contig_315_corr_2_np12_721
Type: pfam
Location: 763455 - 765116 (+)
Type: pfam
Location: 763455 - 765116 (+)
Gene ID: A130_contig_315_corr_2_np12_722
Type: pfam
Location: 765148 - 766044 (+)
Type: pfam
Location: 765148 - 766044 (+)
Gene ID: A130_contig_315_corr_2_np12_723
Type: TC
Location: 766317 - 767711 (+)
Type: TC
Location: 766317 - 767711 (+)
Gene ID: A130_contig_315_corr_2_np12_724
Type: pfam
Location: 767715 - 768812 (+)
Type: pfam
Location: 767715 - 768812 (+)
Gene ID: A130_contig_315_corr_2_np12_725
Type: CAZyme
Location: 768825 - 769889 (+)
Type: CAZyme
Location: 768825 - 769889 (+)
Gene ID: A130_contig_315_corr_2_np12_726
Type: CAZyme
Location: 769889 - 770998 (+)
Type: CAZyme
Location: 769889 - 770998 (+)
Gene ID: A130_contig_315_corr_2_np12_727
Type: CAZyme
Location: 771001 - 772098 (+)
Type: CAZyme
Location: 771001 - 772098 (+)
Gene ID: A130_contig_315_corr_2_np12_728
Type: pfam
Location: 772086 - 772910 (+)
Type: pfam
Location: 772086 - 772910 (+)
Gene ID: A130_contig_315_corr_2_np12_729
Type: CAZyme
Location: 772898 - 773962 (+)
Type: CAZyme
Location: 772898 - 773962 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Lachnospirales
Family
Lachnospiraceae
Genus
Sellimonas
Species
Sellimonas intestinalis
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
Loading chart...
No differentially abundant genes found in the 2019 study.