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Cluster: A130.bin_14_CGC20

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC A130_contig_1628 A130_contig_1628_10 8423 10270 + 3.A.1.111.2
TC A130_contig_1628 A130_contig_1628_11 10251 12116 + 3.A.1.111.2
peptidase A130_contig_1628 A130_contig_1628_12 12264 13658 + M18.UPW
TC A130_contig_1628 A130_contig_1628_13 13808 15187 + 2.A.38.1.1
TC A130_contig_1628 A130_contig_1628_14 15177 16622 + 2.A.38.1.1
TF A130_contig_1628 A130_contig_1628_15 16650 17606 - HTH_AraC
CAZyme A130_contig_1628 A130_contig_1628_16 17830 19716 + GH129
STP A130_contig_1628 A130_contig_1628_17 20044 20562 + SBP_bac_1
STP A130_contig_1628 A130_contig_1628_18 20501 21337 + SBP_bac_1
TC A130_contig_1628 A130_contig_1628_19 21361 22287 + 3.A.1.1.17
TC A130_contig_1628 A130_contig_1628_20 22308 23126 + 3.A.1.1.36
TC A130_contig_1628 A130_contig_1628_21 23262 24089 - 3.A.1.1.36
TC A130_contig_1628 A130_contig_1628_22 24108 25037 - 3.A.1.1.11
TC A130_contig_1628 A130_contig_1628_23 25068 26351 - 3.A.1.1.40
pfam A130_contig_1628 A130_contig_1628_24 26567 27646 - Phage_integrase | Arm-DNA-bind_4 | Phage_int_SAM_3
TC A130_contig_1628 A130_contig_1628_25 27898 29151 + 8.A.59.4.2
NULL(UNKNOWN) A130_contig_1628 A130_contig_1628_26 29254 29355 + NULL(UNKNOWN)
[View Structural Homologs]
TC A130_contig_1628 A130_contig_1628_27 29452 30123 - 9.B.28.1.2
TC A130_contig_1628 A130_contig_1628_28 30404 33037 + 4.A.2.1.17
TC A130_contig_1628 A130_contig_1628_29 33212 34945 + 3.A.1.106.12
TC A130_contig_1628 A130_contig_1628_30 34938 36614 + 3.A.1.106.2
Gene ID: A130_contig_1628_10
Type: TC
Location: 8423 - 10270 (+)
Gene ID: A130_contig_1628_11
Type: TC
Location: 10251 - 12116 (+)
Gene ID: A130_contig_1628_12
Type: peptidase
Location: 12264 - 13658 (+)
Gene ID: A130_contig_1628_13
Type: TC
Location: 13808 - 15187 (+)
Gene ID: A130_contig_1628_14
Type: TC
Location: 15177 - 16622 (+)
Gene ID: A130_contig_1628_15
Type: TF
Location: 16650 - 17606 (-)
Gene ID: A130_contig_1628_16
Type: CAZyme
Location: 17830 - 19716 (+)
Gene ID: A130_contig_1628_17
Type: STP
Location: 20044 - 20562 (+)
Gene ID: A130_contig_1628_18
Type: STP
Location: 20501 - 21337 (+)
Gene ID: A130_contig_1628_19
Type: TC
Location: 21361 - 22287 (+)
Gene ID: A130_contig_1628_20
Type: TC
Location: 22308 - 23126 (+)
Gene ID: A130_contig_1628_21
Type: TC
Location: 23262 - 24089 (-)
Gene ID: A130_contig_1628_22
Type: TC
Location: 24108 - 25037 (-)
Gene ID: A130_contig_1628_23
Type: TC
Location: 25068 - 26351 (-)
Gene ID: A130_contig_1628_24
Type: pfam
Location: 26567 - 27646 (-)
Gene ID: A130_contig_1628_25
Type: TC
Location: 27898 - 29151 (+)
Gene ID: A130_contig_1628_26
Type:
Location: 29254 - 29355 (+)
Gene ID: A130_contig_1628_27
Type: TC
Location: 29452 - 30123 (-)
Gene ID: A130_contig_1628_28
Type: TC
Location: 30404 - 33037 (+)
Gene ID: A130_contig_1628_29
Type: TC
Location: 33212 - 34945 (+)
Gene ID: A130_contig_1628_30
Type: TC
Location: 34938 - 36614 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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