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Cluster: A130.bin_14_CGC16

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
CAZyme A130_contig_476 A130_contig_476_203 221936 222946 - GH177
STP A130_contig_476 A130_contig_476_204 223461 224741 + SBP_bac_1
TC A130_contig_476 A130_contig_476_205 224806 225696 + 3.A.1.1.18
TC A130_contig_476 A130_contig_476_206 225696 226538 + 3.A.1.1.34
CAZyme A130_contig_476 A130_contig_476_207 226566 228437 + GH20
pfam A130_contig_476 A130_contig_476_208 228600 230504 - tRNA-synt_1 | tRNA-synt_1 | tRNA_bind | Anticodon_1 | tRNA-synt_1g | tRNA-synt_1g | Anticodon_3
pfam A130_contig_476 A130_contig_476_209 230894 231721 - FdhD-NarQ
TC A130_contig_476 A130_contig_476_210 231755 233356 - 3.D.1.9.2
TC A130_contig_476 A130_contig_476_211 233405 234466 - 3.D.1.9.2
STP A130_contig_476 A130_contig_476_212 234463 236298 - Pyr_redox_2
TC A130_contig_476 A130_contig_476_213 236363 237166 - 1.A.16.1.1
Gene ID: A130_contig_476_203
Type: CAZyme
Location: 221936 - 222946 (-)
Gene ID: A130_contig_476_204
Type: STP
Location: 223461 - 224741 (+)
Gene ID: A130_contig_476_205
Type: TC
Location: 224806 - 225696 (+)
Gene ID: A130_contig_476_206
Type: TC
Location: 225696 - 226538 (+)
Gene ID: A130_contig_476_207
Type: CAZyme
Location: 226566 - 228437 (+)
Gene ID: A130_contig_476_208
Type: pfam
Location: 228600 - 230504 (-)
Gene ID: A130_contig_476_209
Type: pfam
Location: 230894 - 231721 (-)
Gene ID: A130_contig_476_210
Type: TC
Location: 231755 - 233356 (-)
Gene ID: A130_contig_476_211
Type: TC
Location: 233405 - 234466 (-)
Gene ID: A130_contig_476_212
Type: STP
Location: 234463 - 236298 (-)
Gene ID: A130_contig_476_213
Type: TC
Location: 236363 - 237166 (-)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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Differentially Abundant Genes

Gene ID Condition Pair log2FC FDR P-value
A130_contig_476_208 vegan > omnivore 1.49833 0.02973

🧭 Explore Read Mapping of CGC

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