Cluster: A130.bin_14_CGC16
🧬 Cluster Details
- Gene Count: 11
- CAZyme Count: 2
- Substrate:
- Genome ID: A130.bin_14
- Continent: Asia
- Source Study: Jin et al., 2023 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | A130_contig_476 | A130_contig_476_203 | 221936 | 222946 | - | GH177 |
| STP | A130_contig_476 | A130_contig_476_204 | 223461 | 224741 | + | SBP_bac_1 |
| TC | A130_contig_476 | A130_contig_476_205 | 224806 | 225696 | + | 3.A.1.1.18 |
| TC | A130_contig_476 | A130_contig_476_206 | 225696 | 226538 | + | 3.A.1.1.34 |
| CAZyme | A130_contig_476 | A130_contig_476_207 | 226566 | 228437 | + | GH20 |
| pfam | A130_contig_476 | A130_contig_476_208 | 228600 | 230504 | - | tRNA-synt_1 | tRNA-synt_1 | tRNA_bind | Anticodon_1 | tRNA-synt_1g | tRNA-synt_1g | Anticodon_3 |
| pfam | A130_contig_476 | A130_contig_476_209 | 230894 | 231721 | - | FdhD-NarQ |
| TC | A130_contig_476 | A130_contig_476_210 | 231755 | 233356 | - | 3.D.1.9.2 |
| TC | A130_contig_476 | A130_contig_476_211 | 233405 | 234466 | - | 3.D.1.9.2 |
| STP | A130_contig_476 | A130_contig_476_212 | 234463 | 236298 | - | Pyr_redox_2 |
| TC | A130_contig_476 | A130_contig_476_213 | 236363 | 237166 | - | 1.A.16.1.1 |
Gene ID: A130_contig_476_203
Type: CAZyme
Location: 221936 - 222946 (-)
Type: CAZyme
Location: 221936 - 222946 (-)
Gene ID: A130_contig_476_204
Type: STP
Location: 223461 - 224741 (+)
Type: STP
Location: 223461 - 224741 (+)
Gene ID: A130_contig_476_205
Type: TC
Location: 224806 - 225696 (+)
Type: TC
Location: 224806 - 225696 (+)
Gene ID: A130_contig_476_206
Type: TC
Location: 225696 - 226538 (+)
Type: TC
Location: 225696 - 226538 (+)
Gene ID: A130_contig_476_207
Type: CAZyme
Location: 226566 - 228437 (+)
Type: CAZyme
Location: 226566 - 228437 (+)
Gene ID: A130_contig_476_208
Type: pfam
Location: 228600 - 230504 (-)
Type: pfam
Location: 228600 - 230504 (-)
Gene ID: A130_contig_476_209
Type: pfam
Location: 230894 - 231721 (-)
Type: pfam
Location: 230894 - 231721 (-)
Gene ID: A130_contig_476_210
Type: TC
Location: 231755 - 233356 (-)
Type: TC
Location: 231755 - 233356 (-)
Gene ID: A130_contig_476_211
Type: TC
Location: 233405 - 234466 (-)
Type: TC
Location: 233405 - 234466 (-)
Gene ID: A130_contig_476_212
Type: STP
Location: 234463 - 236298 (-)
Type: STP
Location: 234463 - 236298 (-)
Gene ID: A130_contig_476_213
Type: TC
Location: 236363 - 237166 (-)
Type: TC
Location: 236363 - 237166 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Lachnospirales
Family
Lachnospiraceae
Genus
UBA9414
Species
UBA9414 sp018365895
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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Differentially Abundant Genes
| Gene ID | Condition Pair | log2FC | FDR P-value |
|---|---|---|---|
| A130_contig_476_208 | vegan > omnivore | 1.49833 | 0.02973 |