Cluster: A125.bin_6_CGC8
🧬 Cluster Details
- Gene Count: 7
- CAZyme Count: 1
- Substrate:
- Genome ID: A125.bin_6
- CGC Family ID: CGCFAM_04274
- Continent: Asia
- Source Study: Jin et al., 2023 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | A125_contig_472 | A125_contig_472_350 | 409739 | 411100 | + | 2.A.66.1.45 |
| TC | A125_contig_472 | A125_contig_472_351 | 411097 | 412494 | + | 2.A.66.1.26 |
| NULL(UNKNOWN) | A125_contig_472 | A125_contig_472_352 | 412579 | 413271 | + |
NULL(UNKNOWN)
[View Structural Homologs] |
| pfam | A125_contig_472 | A125_contig_472_353 | 413289 | 414308 | + | GGGtGRT |
| TC | A125_contig_472 | A125_contig_472_354 | 414711 | 416336 | + | 2.A.35.2.1 |
| TC | A125_contig_472 | A125_contig_472_355 | 416413 | 418155 | - | 3.A.1.106.2 |
| CAZyme | A125_contig_472 | A125_contig_472_356 | 418353 | 419372 | + | GH25 |
Gene ID: A125_contig_472_350
Type: TC
Location: 409739 - 411100 (+)
Type: TC
Location: 409739 - 411100 (+)
Gene ID: A125_contig_472_351
Type: TC
Location: 411097 - 412494 (+)
Type: TC
Location: 411097 - 412494 (+)
Gene ID: A125_contig_472_352
Type:
Location: 412579 - 413271 (+)
Type:
Location: 412579 - 413271 (+)
Gene ID: A125_contig_472_353
Type: pfam
Location: 413289 - 414308 (+)
Type: pfam
Location: 413289 - 414308 (+)
Gene ID: A125_contig_472_354
Type: TC
Location: 414711 - 416336 (+)
Type: TC
Location: 414711 - 416336 (+)
Gene ID: A125_contig_472_355
Type: TC
Location: 416413 - 418155 (-)
Type: TC
Location: 416413 - 418155 (-)
Gene ID: A125_contig_472_356
Type: CAZyme
Location: 418353 - 419372 (+)
Type: CAZyme
Location: 418353 - 419372 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Lachnospirales
Family
Lachnospiraceae
Genus
Alitiscatomonas
Species
Alitiscatomonas aceti
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.