Cluster: A125.bin_6_CGC7
🧬 Cluster Details
- Gene Count: 6
- CAZyme Count: 2
- Substrate:
- Genome ID: A125.bin_6
- CGC Family ID: CGCFAM_00009
- Continent: Asia
- Source Study: Jin et al., 2023 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | A125_contig_472 | A125_contig_472_262 | 300328 | 301263 | + | GT2 |
| pfam | A125_contig_472 | A125_contig_472_263 | 301349 | 301924 | + | dTDP_sugar_isom |
| TC | A125_contig_472 | A125_contig_472_264 | 301941 | 302759 | + | 3.A.1.104.2 |
| TC | A125_contig_472 | A125_contig_472_265 | 302769 | 304112 | + | 3.A.1.103.6 |
| pfam | A125_contig_472 | A125_contig_472_266 | 304124 | 304975 | + | Methyltransf_11 | Methyltransf_12 | Methyltransf_25 |
| CAZyme | A125_contig_472 | A125_contig_472_267 | 304972 | 308121 | + | GT2 |
Gene ID: A125_contig_472_262
Type: CAZyme
Location: 300328 - 301263 (+)
Type: CAZyme
Location: 300328 - 301263 (+)
Gene ID: A125_contig_472_263
Type: pfam
Location: 301349 - 301924 (+)
Type: pfam
Location: 301349 - 301924 (+)
Gene ID: A125_contig_472_264
Type: TC
Location: 301941 - 302759 (+)
Type: TC
Location: 301941 - 302759 (+)
Gene ID: A125_contig_472_265
Type: TC
Location: 302769 - 304112 (+)
Type: TC
Location: 302769 - 304112 (+)
Gene ID: A125_contig_472_266
Type: pfam
Location: 304124 - 304975 (+)
Type: pfam
Location: 304124 - 304975 (+)
Gene ID: A125_contig_472_267
Type: CAZyme
Location: 304972 - 308121 (+)
Type: CAZyme
Location: 304972 - 308121 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Lachnospirales
Family
Lachnospiraceae
Genus
Alitiscatomonas
Species
Alitiscatomonas aceti
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.