Cluster: A125.bin_6_CGC14
🧬 Cluster Details
- Gene Count: 13
- CAZyme Count: 1
- Substrate:
- Genome ID: A125.bin_6
- Continent: Asia
- Source Study: Jin et al., 2023 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | A125_contig_2776 | A125_contig_2776_368 | 394444 | 395796 | + | 2.A.66.1.33 |
| TF | A125_contig_2776 | A125_contig_2776_369 | 395934 | 396383 | + | MarR |
| TC | A125_contig_2776 | A125_contig_2776_370 | 396385 | 398127 | + | 3.A.1.135.5 |
| TC | A125_contig_2776 | A125_contig_2776_371 | 398124 | 400016 | + | 3.A.1.135.5 |
| TC | A125_contig_2776 | A125_contig_2776_372 | 400222 | 401550 | + | 3.D.6.1.2 |
| TC | A125_contig_2776 | A125_contig_2776_373 | 401563 | 402507 | + | 3.D.6.1.2 |
| TC | A125_contig_2776 | A125_contig_2776_374 | 402494 | 403117 | + | 3.D.6.1.2 |
| TC | A125_contig_2776 | A125_contig_2776_375 | 403131 | 403943 | + | 3.D.6.1.2 |
| TC | A125_contig_2776 | A125_contig_2776_376 | 403959 | 404534 | + | 3.D.6.1.2 |
| TC | A125_contig_2776 | A125_contig_2776_377 | 404548 | 405342 | + | 3.D.6.1.2 |
| pfam | A125_contig_2776 | A125_contig_2776_378 | 405535 | 406059 | - | DUF4143 |
| peptidase | A125_contig_2776 | A125_contig_2776_379 | 406409 | 407782 | + | I04.075 |
| CAZyme | A125_contig_2776 | A125_contig_2776_380 | 407873 | 410551 | - | GT51 |
Gene ID: A125_contig_2776_368
Type: TC
Location: 394444 - 395796 (+)
Type: TC
Location: 394444 - 395796 (+)
Gene ID: A125_contig_2776_369
Type: TF
Location: 395934 - 396383 (+)
Type: TF
Location: 395934 - 396383 (+)
Gene ID: A125_contig_2776_370
Type: TC
Location: 396385 - 398127 (+)
Type: TC
Location: 396385 - 398127 (+)
Gene ID: A125_contig_2776_371
Type: TC
Location: 398124 - 400016 (+)
Type: TC
Location: 398124 - 400016 (+)
Gene ID: A125_contig_2776_372
Type: TC
Location: 400222 - 401550 (+)
Type: TC
Location: 400222 - 401550 (+)
Gene ID: A125_contig_2776_373
Type: TC
Location: 401563 - 402507 (+)
Type: TC
Location: 401563 - 402507 (+)
Gene ID: A125_contig_2776_374
Type: TC
Location: 402494 - 403117 (+)
Type: TC
Location: 402494 - 403117 (+)
Gene ID: A125_contig_2776_375
Type: TC
Location: 403131 - 403943 (+)
Type: TC
Location: 403131 - 403943 (+)
Gene ID: A125_contig_2776_376
Type: TC
Location: 403959 - 404534 (+)
Type: TC
Location: 403959 - 404534 (+)
Gene ID: A125_contig_2776_377
Type: TC
Location: 404548 - 405342 (+)
Type: TC
Location: 404548 - 405342 (+)
Gene ID: A125_contig_2776_378
Type: pfam
Location: 405535 - 406059 (-)
Type: pfam
Location: 405535 - 406059 (-)
Gene ID: A125_contig_2776_379
Type: peptidase
Location: 406409 - 407782 (+)
Type: peptidase
Location: 406409 - 407782 (+)
Gene ID: A125_contig_2776_380
Type: CAZyme
Location: 407873 - 410551 (-)
Type: CAZyme
Location: 407873 - 410551 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Lachnospirales
Family
Lachnospiraceae
Genus
Alitiscatomonas
Species
Alitiscatomonas aceti
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.