dbCAN Logo

Cluster: A125.bin_6_CGC1

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC A125_contig_1214 A125_contig_1214_32 30741 32552 + 3.A.16.1.1
CAZyme A125_contig_1214 A125_contig_1214_33 32963 35008 + GH13_39
TC A125_contig_1214 A125_contig_1214_34 35446 36588 - 2.A.45.2.6
pfam A125_contig_1214 A125_contig_1214_35 37048 37635 + Ribosomal_L25p | Ribosomal_TL5_C
NULL(UNKNOWN) A125_contig_1214 A125_contig_1214_36 38042 38155 + NULL(UNKNOWN)
[View Structural Homologs]
TC A125_contig_1214 A125_contig_1214_37 38252 39205 + 3.A.1.5.20
TC A125_contig_1214 A125_contig_1214_38 39220 40086 + 3.A.1.5.20
TC A125_contig_1214 A125_contig_1214_39 40125 41798 + 3.A.1.5.20
TC A125_contig_1214 A125_contig_1214_40 41869 42858 + 3.A.1.5.20
TC A125_contig_1214 A125_contig_1214_41 42858 43835 + 3.A.1.5.20
Gene ID: A125_contig_1214_32
Type: TC
Location: 30741 - 32552 (+)
Gene ID: A125_contig_1214_33
Type: CAZyme
Location: 32963 - 35008 (+)
Gene ID: A125_contig_1214_34
Type: TC
Location: 35446 - 36588 (-)
Gene ID: A125_contig_1214_35
Type: pfam
Location: 37048 - 37635 (+)
Gene ID: A125_contig_1214_36
Type:
Location: 38042 - 38155 (+)
Gene ID: A125_contig_1214_37
Type: TC
Location: 38252 - 39205 (+)
Gene ID: A125_contig_1214_38
Type: TC
Location: 39220 - 40086 (+)
Gene ID: A125_contig_1214_39
Type: TC
Location: 40125 - 41798 (+)
Gene ID: A125_contig_1214_40
Type: TC
Location: 41869 - 42858 (+)
Gene ID: A125_contig_1214_41
Type: TC
Location: 42858 - 43835 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

Loading chart...

No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

← Back to Cluster List