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Cluster: A125.bin_5_CGC38

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC A125_contig_495 A125_contig_495_147 159363 160430 + 9.B.97.6.2
CAZyme A125_contig_495 A125_contig_495_148 160464 161603 + GT2
CAZyme A125_contig_495 A125_contig_495_149 161709 163856 + GT2 | GT2
STP A125_contig_495 A125_contig_495_150 163900 165027 + Pyr_redox
pfam A125_contig_495 A125_contig_495_151 165056 165460 + CTP_transf_like
CAZyme A125_contig_495 A125_contig_495_152 165482 166360 - CE4
Gene ID: A125_contig_495_147
Type: TC
Location: 159363 - 160430 (+)
Gene ID: A125_contig_495_148
Type: CAZyme
Location: 160464 - 161603 (+)
Gene ID: A125_contig_495_149
Type: CAZyme
Location: 161709 - 163856 (+)
Gene ID: A125_contig_495_150
Type: STP
Location: 163900 - 165027 (+)
Gene ID: A125_contig_495_151
Type: pfam
Location: 165056 - 165460 (+)
Gene ID: A125_contig_495_152
Type: CAZyme
Location: 165482 - 166360 (-)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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Differentially Abundant Genes

Gene ID Condition Pair log2FC FDR P-value
A125_contig_495_151 vegan > omnivore 13.75114 0.02973

🧭 Explore Read Mapping of CGC

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