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Cluster: A125.bin_5_CGC33

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC A125_contig_987 A125_contig_987_266 321908 322981 - 2.A.86.1.9
pfam A125_contig_987 A125_contig_987_267 322987 324375 - MTS | tRNA_U5-meth_tr | Methyltransf_11 | Methyltransf_15 | Methyltransf_25 | Methyltransf_31
NULL(UNKNOWN) A125_contig_987 A125_contig_987_268 324486 324773 - NULL(UNKNOWN)
[View Structural Homologs]
TC A125_contig_987 A125_contig_987_269 324969 326219 + 2.A.40.1.1
CAZyme A125_contig_987 A125_contig_987_270 326243 328639 + GT4
CAZyme A125_contig_987 A125_contig_987_271 328664 330796 + GH13_11
pfam A125_contig_987 A125_contig_987_272 330919 332523 - FGGY_N | FGGY_C
pfam A125_contig_987 A125_contig_987_273 332562 334061 - AraA_N | Arabinose_Iso_C | AraA_central
TC A125_contig_987 A125_contig_987_274 334152 335162 - 3.A.1.2.14
TC A125_contig_987 A125_contig_987_275 335162 336223 - 3.A.1.2.25
TC A125_contig_987 A125_contig_987_276 336216 337742 - 3.A.1.2.23
TC A125_contig_987 A125_contig_987_277 337955 339007 - 3.A.1.2.25
TC A125_contig_987 A125_contig_987_278 339177 340589 - 8.A.59.2.1
TF A125_contig_987 A125_contig_987_279 340586 342217 - HTH_AraC | HTH_AraC
pfam A125_contig_987 A125_contig_987_280 342673 343155 + HAAS
TC A125_contig_987 A125_contig_987_281 343168 343938 - 3.A.1.14.5
TC A125_contig_987 A125_contig_987_282 343955 345013 - 3.A.1.14.9
Gene ID: A125_contig_987_266
Type: TC
Location: 321908 - 322981 (-)
Gene ID: A125_contig_987_267
Type: pfam
Location: 322987 - 324375 (-)
Gene ID: A125_contig_987_268
Type:
Location: 324486 - 324773 (-)
Gene ID: A125_contig_987_269
Type: TC
Location: 324969 - 326219 (+)
Gene ID: A125_contig_987_270
Type: CAZyme
Location: 326243 - 328639 (+)
Gene ID: A125_contig_987_271
Type: CAZyme
Location: 328664 - 330796 (+)
Gene ID: A125_contig_987_272
Type: pfam
Location: 330919 - 332523 (-)
Gene ID: A125_contig_987_273
Type: pfam
Location: 332562 - 334061 (-)
Gene ID: A125_contig_987_274
Type: TC
Location: 334152 - 335162 (-)
Gene ID: A125_contig_987_275
Type: TC
Location: 335162 - 336223 (-)
Gene ID: A125_contig_987_276
Type: TC
Location: 336216 - 337742 (-)
Gene ID: A125_contig_987_277
Type: TC
Location: 337955 - 339007 (-)
Gene ID: A125_contig_987_278
Type: TC
Location: 339177 - 340589 (-)
Gene ID: A125_contig_987_279
Type: TF
Location: 340586 - 342217 (-)
Gene ID: A125_contig_987_280
Type: pfam
Location: 342673 - 343155 (+)
Gene ID: A125_contig_987_281
Type: TC
Location: 343168 - 343938 (-)
Gene ID: A125_contig_987_282
Type: TC
Location: 343955 - 345013 (-)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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