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Cluster: A125.bin_5_CGC12

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC A125_contig_386 A125_contig_386_454 512607 512936 - 3.A.7.19.1
NULL(UNKNOWN) A125_contig_386 A125_contig_386_455 513178 513687 + NULL(UNKNOWN)
[View Structural Homologs]
STP A125_contig_386 A125_contig_386_456 513768 514022 + NUDIX
CAZyme A125_contig_386 A125_contig_386_457 514244 514963 + GH113
STP A125_contig_386 A125_contig_386_458 514976 515107 + Nitro_FeMo-Co
TF A125_contig_386 A125_contig_386_459 515250 516242 - HTH_AraC
TC A125_contig_386 A125_contig_386_460 516628 517557 + 3.A.1.5.3
TC A125_contig_386 A125_contig_386_461 517573 518436 + 3.A.1.5.3
TC A125_contig_386 A125_contig_386_462 518417 519208 + 3.A.1.5.18
TC A125_contig_386 A125_contig_386_463 519218 520156 + 3.A.1.5.15
TC A125_contig_386 A125_contig_386_464 520188 521756 + 3.A.1.5.3
pfam A125_contig_386 A125_contig_386_465 521760 522512 + PCMT | Ubie_methyltran | MTS | PrmA | Methyltransf_11 | Methyltransf_12 | Methyltransf_23 | Methyltransf_25 | Methyltransf_31
pfam A125_contig_386 A125_contig_386_466 522514 523260 + PCMT | Ubie_methyltran | Methyltransf_29 | MTS | PrmA | MetW | Methyltransf_9 | Methyltransf_11 | Methyltransf_12 | Methyltransf_23 | Methyltransf_25 | Methyltransf_31
TC A125_contig_386 A125_contig_386_467 523262 524989 + 3.A.1.106.12
TC A125_contig_386 A125_contig_386_468 524982 526772 + 3.A.1.106.11
Gene ID: A125_contig_386_454
Type: TC
Location: 512607 - 512936 (-)
Gene ID: A125_contig_386_455
Type:
Location: 513178 - 513687 (+)
Gene ID: A125_contig_386_456
Type: STP
Location: 513768 - 514022 (+)
Gene ID: A125_contig_386_457
Type: CAZyme
Location: 514244 - 514963 (+)
Gene ID: A125_contig_386_458
Type: STP
Location: 514976 - 515107 (+)
Gene ID: A125_contig_386_459
Type: TF
Location: 515250 - 516242 (-)
Gene ID: A125_contig_386_460
Type: TC
Location: 516628 - 517557 (+)
Gene ID: A125_contig_386_461
Type: TC
Location: 517573 - 518436 (+)
Gene ID: A125_contig_386_462
Type: TC
Location: 518417 - 519208 (+)
Gene ID: A125_contig_386_463
Type: TC
Location: 519218 - 520156 (+)
Gene ID: A125_contig_386_464
Type: TC
Location: 520188 - 521756 (+)
Gene ID: A125_contig_386_465
Type: pfam
Location: 521760 - 522512 (+)
Gene ID: A125_contig_386_466
Type: pfam
Location: 522514 - 523260 (+)
Gene ID: A125_contig_386_467
Type: TC
Location: 523262 - 524989 (+)
Gene ID: A125_contig_386_468
Type: TC
Location: 524982 - 526772 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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Differentially Abundant Genes

Gene ID Condition Pair log2FC FDR P-value
A125_contig_386_457 vegetarian > omnivore 1.12817 0.03328
A125_contig_386_457 vegetarian > vegan 1.28958 0.00949
A125_contig_386_458 vegetarian > vegan 1.06113 0.00566
A125_contig_386_460 vegan > omnivore 1.06238 0.02973

🧭 Explore Read Mapping of CGC

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