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Cluster: A125.bin_5_CGC10

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC A125_contig_386 A125_contig_386_391 436370 437128 - 9.B.158.1.1
TF A125_contig_386 A125_contig_386_392 437190 437951 - HTH_DeoR
CAZyme A125_contig_386 A125_contig_386_393 437988 439298 - GH29
TC A125_contig_386 A125_contig_386_394 439320 440303 - 3.A.1.5.20
TC A125_contig_386 A125_contig_386_395 440310 441293 - 3.A.1.5.15
TC A125_contig_386 A125_contig_386_396 441305 442207 - 3.A.1.5.11
TC A125_contig_386 A125_contig_386_397 442219 443139 - 3.A.1.5.11
TC A125_contig_386 A125_contig_386_398 443326 444936 - 3.A.1.5.11
Gene ID: A125_contig_386_391
Type: TC
Location: 436370 - 437128 (-)
Gene ID: A125_contig_386_392
Type: TF
Location: 437190 - 437951 (-)
Gene ID: A125_contig_386_393
Type: CAZyme
Location: 437988 - 439298 (-)
Gene ID: A125_contig_386_394
Type: TC
Location: 439320 - 440303 (-)
Gene ID: A125_contig_386_395
Type: TC
Location: 440310 - 441293 (-)
Gene ID: A125_contig_386_396
Type: TC
Location: 441305 - 442207 (-)
Gene ID: A125_contig_386_397
Type: TC
Location: 442219 - 443139 (-)
Gene ID: A125_contig_386_398
Type: TC
Location: 443326 - 444936 (-)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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Differentially Abundant Genes

Gene ID Condition Pair log2FC FDR P-value
A125_contig_386_396 vegan > omnivore 1.66292 0.03151

🧭 Explore Read Mapping of CGC

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