dbCAN Logo

Cluster: A125.bin_5_CGC1

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
CAZyme A125_contig_386 A125_contig_386_189 192444 193547 + CE9
STP A125_contig_386 A125_contig_386_190 193649 196357 - HATPase_c | HisKA
TF A125_contig_386 A125_contig_386_191 196420 197112 - Trans_reg_C
TC A125_contig_386 A125_contig_386_192 197705 198451 + 3.A.1.23.8
pfam A125_contig_386 A125_contig_386_193 198453 198752 + CbiN
pfam A125_contig_386 A125_contig_386_194 198789 199565 + CbiQ
TC A125_contig_386 A125_contig_386_195 199562 201226 + 3.A.1.23.8
Gene ID: A125_contig_386_189
Type: CAZyme
Location: 192444 - 193547 (+)
Gene ID: A125_contig_386_190
Type: STP
Location: 193649 - 196357 (-)
Gene ID: A125_contig_386_191
Type: TF
Location: 196420 - 197112 (-)
Gene ID: A125_contig_386_192
Type: TC
Location: 197705 - 198451 (+)
Gene ID: A125_contig_386_193
Type: pfam
Location: 198453 - 198752 (+)
Gene ID: A125_contig_386_194
Type: pfam
Location: 198789 - 199565 (+)
Gene ID: A125_contig_386_195
Type: TC
Location: 199562 - 201226 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

Loading chart...

Differentially Abundant Genes

Gene ID Condition Pair log2FC FDR P-value
A125_contig_386_191 vegetarian > vegan 1.51947 0.00949

🧭 Explore Read Mapping of CGC

← Back to Cluster List