Cluster: A112.bin_7_CGC8
🧬 Cluster Details
- Gene Count: 4
- CAZyme Count: 1
- Substrate:
- Genome ID: A112.bin_7
- CGC Family ID: CGCFAM_04265
- Continent: Asia
- Source Study: Jin et al., 2023 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | A112_contig_5092 | A112_contig_5092_256 | 277068 | 278441 | - | 2.A.66.1.28 |
| pfam | A112_contig_5092 | A112_contig_5092_257 | 278700 | 279401 | - | MTS | Methyltransf_31 |
| pfam | A112_contig_5092 | A112_contig_5092_258 | 279493 | 280158 | - | Hydrolase | HAD | HAD_2 |
| CAZyme | A112_contig_5092 | A112_contig_5092_259 | 280270 | 281862 | - | GH13_20 |
Gene ID: A112_contig_5092_256
Type: TC
Location: 277068 - 278441 (-)
Type: TC
Location: 277068 - 278441 (-)
Gene ID: A112_contig_5092_257
Type: pfam
Location: 278700 - 279401 (-)
Type: pfam
Location: 278700 - 279401 (-)
Gene ID: A112_contig_5092_258
Type: pfam
Location: 279493 - 280158 (-)
Type: pfam
Location: 279493 - 280158 (-)
Gene ID: A112_contig_5092_259
Type: CAZyme
Location: 280270 - 281862 (-)
Type: CAZyme
Location: 280270 - 281862 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Oscillospirales
Family
Ruminococcaceae
Genus
Ruminococcus_C
Species
Ruminococcus_C sp900545285
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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Differentially Abundant Genes
| Gene ID | Condition Pair | log2FC | FDR P-value |
|---|---|---|---|
| A112_contig_5092_256 | vegan > omnivore | 1.37810 | 0.00316 |
| A112_contig_5092_256 | vegetarian > omnivore | 1.08735 | 0.00207 |