dbCAN Logo

Cluster: A112.bin_7_CGC4

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC A112_contig_5085 A112_contig_5085_178 196799 199078 - 3.A.9.1.2
NULL(UNKNOWN) A112_contig_5085 A112_contig_5085_179 199299 199421 + NULL(UNKNOWN)
[View Structural Homologs]
TF A112_contig_5085 A112_contig_5085_180 199487 200923 - GntR
CAZyme A112_contig_5085 A112_contig_5085_181 200889 204002 - GH59
pfam A112_contig_5085 A112_contig_5085_182 204005 204712 - Methyltransf_4 | Methyltransf_31
pfam A112_contig_5085 A112_contig_5085_183 204935 205414 - dCMP_cyt_deam_1 | MafB19-deam
CAZyme A112_contig_5085 A112_contig_5085_184 205430 207289 - GH5_1
Gene ID: A112_contig_5085_178
Type: TC
Location: 196799 - 199078 (-)
Gene ID: A112_contig_5085_179
Type:
Location: 199299 - 199421 (+)
Gene ID: A112_contig_5085_180
Type: TF
Location: 199487 - 200923 (-)
Gene ID: A112_contig_5085_181
Type: CAZyme
Location: 200889 - 204002 (-)
Gene ID: A112_contig_5085_182
Type: pfam
Location: 204005 - 204712 (-)
Gene ID: A112_contig_5085_183
Type: pfam
Location: 204935 - 205414 (-)
Gene ID: A112_contig_5085_184
Type: CAZyme
Location: 205430 - 207289 (-)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

Loading chart...

Differentially Abundant Genes

Gene ID Condition Pair log2FC FDR P-value
A112_contig_5085_182 vegan > omnivore 2.83546 0.00316
A112_contig_5085_182 vegetarian > omnivore 2.91866 0.00207

🧭 Explore Read Mapping of CGC

← Back to Cluster List