Cluster: A112.bin_7_CGC35
🧬 Cluster Details
- Gene Count: 7
- CAZyme Count: 1
- Substrate:
- Genome ID: A112.bin_7
- CGC Family ID: CGCFAM_06571
- Continent: Asia
- Source Study: Jin et al., 2023 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | A112_contig_5853 | A112_contig_5853_198 | 240160 | 241200 | - | 9.B.97.4.1 |
| pfam | A112_contig_5853 | A112_contig_5853_199 | 241753 | 242178 | - | CTP_transf_like |
| pfam | A112_contig_5853 | A112_contig_5853_200 | 242181 | 243068 | - | LicD |
| TC | A112_contig_5853 | A112_contig_5853_201 | 243073 | 244530 | - | 2.A.66.2.16 |
| TC | A112_contig_5853 | A112_contig_5853_202 | 244553 | 245545 | - | 9.B.97.1.2 |
| NULL(UNKNOWN) | A112_contig_5853 | A112_contig_5853_203 | 245542 | 246729 | - |
NULL(UNKNOWN)
[View Structural Homologs] |
| CAZyme | A112_contig_5853 | A112_contig_5853_204 | 246732 | 247817 | - | GT113 |
Gene ID: A112_contig_5853_198
Type: TC
Location: 240160 - 241200 (-)
Type: TC
Location: 240160 - 241200 (-)
Gene ID: A112_contig_5853_199
Type: pfam
Location: 241753 - 242178 (-)
Type: pfam
Location: 241753 - 242178 (-)
Gene ID: A112_contig_5853_200
Type: pfam
Location: 242181 - 243068 (-)
Type: pfam
Location: 242181 - 243068 (-)
Gene ID: A112_contig_5853_201
Type: TC
Location: 243073 - 244530 (-)
Type: TC
Location: 243073 - 244530 (-)
Gene ID: A112_contig_5853_202
Type: TC
Location: 244553 - 245545 (-)
Type: TC
Location: 244553 - 245545 (-)
Gene ID: A112_contig_5853_203
Type:
Location: 245542 - 246729 (-)
Type:
Location: 245542 - 246729 (-)
Gene ID: A112_contig_5853_204
Type: CAZyme
Location: 246732 - 247817 (-)
Type: CAZyme
Location: 246732 - 247817 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Oscillospirales
Family
Ruminococcaceae
Genus
Ruminococcus_C
Species
Ruminococcus_C sp900545285
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.