Cluster: A112.bin_7_CGC30
🧬 Cluster Details
- Gene Count: 6
- CAZyme Count: 2
- Substrate:
- Genome ID: A112.bin_7
- Continent: Asia
- Source Study: Jin et al., 2023 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | A112_contig_5853 | A112_contig_5853_36 | 46538 | 49978 | + | CBM13 | CBM13 | PL11 |
| pfam | A112_contig_5853 | A112_contig_5853_37 | 50258 | 51268 | + | ZnuA |
| TC | A112_contig_5853 | A112_contig_5853_38 | 51271 | 51975 | + | 3.A.1.15.4 |
| TC | A112_contig_5853 | A112_contig_5853_39 | 51980 | 52831 | + | 3.A.1.15.10 |
| pfam | A112_contig_5853 | A112_contig_5853_40 | 52912 | 53715 | + | Dockerin_1 |
| CAZyme | A112_contig_5853 | A112_contig_5853_41 | 53823 | 55280 | - | GH73 |
Gene ID: A112_contig_5853_36
Type: CAZyme
Location: 46538 - 49978 (+)
Type: CAZyme
Location: 46538 - 49978 (+)
Gene ID: A112_contig_5853_37
Type: pfam
Location: 50258 - 51268 (+)
Type: pfam
Location: 50258 - 51268 (+)
Gene ID: A112_contig_5853_38
Type: TC
Location: 51271 - 51975 (+)
Type: TC
Location: 51271 - 51975 (+)
Gene ID: A112_contig_5853_39
Type: TC
Location: 51980 - 52831 (+)
Type: TC
Location: 51980 - 52831 (+)
Gene ID: A112_contig_5853_40
Type: pfam
Location: 52912 - 53715 (+)
Type: pfam
Location: 52912 - 53715 (+)
Gene ID: A112_contig_5853_41
Type: CAZyme
Location: 53823 - 55280 (-)
Type: CAZyme
Location: 53823 - 55280 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Oscillospirales
Family
Ruminococcaceae
Genus
Ruminococcus_C
Species
Ruminococcus_C sp900545285
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.