Cluster: A112.bin_7_CGC29
🧬 Cluster Details
- Gene Count: 5
- CAZyme Count: 1
- Substrate:
- Genome ID: A112.bin_7
- CGC Family ID: CGCFAM_04263
- Continent: Asia
- Source Study: Jin et al., 2023 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | A112_contig_5853 | A112_contig_5853_10 | 10788 | 13463 | + | CBM3 | GH9 |
| NULL(UNKNOWN) | A112_contig_5853 | A112_contig_5853_11 | 13562 | 14152 | - |
NULL(UNKNOWN)
[View Structural Homologs] |
| TF | A112_contig_5853 | A112_contig_5853_12 | 14469 | 14927 | + | MarR |
| TC | A112_contig_5853 | A112_contig_5853_13 | 14924 | 16657 | + | 3.A.1.135.5 |
| TC | A112_contig_5853 | A112_contig_5853_14 | 16654 | 18561 | + | 3.A.1.135.5 |
Gene ID: A112_contig_5853_10
Type: CAZyme
Location: 10788 - 13463 (+)
Type: CAZyme
Location: 10788 - 13463 (+)
Gene ID: A112_contig_5853_11
Type:
Location: 13562 - 14152 (-)
Type:
Location: 13562 - 14152 (-)
Gene ID: A112_contig_5853_12
Type: TF
Location: 14469 - 14927 (+)
Type: TF
Location: 14469 - 14927 (+)
Gene ID: A112_contig_5853_13
Type: TC
Location: 14924 - 16657 (+)
Type: TC
Location: 14924 - 16657 (+)
Gene ID: A112_contig_5853_14
Type: TC
Location: 16654 - 18561 (+)
Type: TC
Location: 16654 - 18561 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Oscillospirales
Family
Ruminococcaceae
Genus
Ruminococcus_C
Species
Ruminococcus_C sp900545285
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.