Cluster: A112.bin_7_CGC21
🧬 Cluster Details
- Gene Count: 5
- CAZyme Count: 1
- Substrate:
- Genome ID: A112.bin_7
- Continent: Asia
- Source Study: Jin et al., 2023 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | A112_contig_5096 | A112_contig_5096_56 | 66294 | 67895 | + | 3.D.10.1.6 |
| TC | A112_contig_5096 | A112_contig_5096_57 | 68235 | 70844 | + | 3.A.3.2.21 |
| pfam | A112_contig_5096 | A112_contig_5096_58 | 70937 | 71803 | - | BacA |
| pfam | A112_contig_5096 | A112_contig_5096_59 | 72112 | 72420 | + | SpoIIID |
| CAZyme | A112_contig_5096 | A112_contig_5096_60 | 72488 | 74551 | - | CBM35 | GH26 |
Gene ID: A112_contig_5096_56
Type: TC
Location: 66294 - 67895 (+)
Type: TC
Location: 66294 - 67895 (+)
Gene ID: A112_contig_5096_57
Type: TC
Location: 68235 - 70844 (+)
Type: TC
Location: 68235 - 70844 (+)
Gene ID: A112_contig_5096_58
Type: pfam
Location: 70937 - 71803 (-)
Type: pfam
Location: 70937 - 71803 (-)
Gene ID: A112_contig_5096_59
Type: pfam
Location: 72112 - 72420 (+)
Type: pfam
Location: 72112 - 72420 (+)
Gene ID: A112_contig_5096_60
Type: CAZyme
Location: 72488 - 74551 (-)
Type: CAZyme
Location: 72488 - 74551 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Oscillospirales
Family
Ruminococcaceae
Genus
Ruminococcus_C
Species
Ruminococcus_C sp900545285
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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Differentially Abundant Genes
| Gene ID | Condition Pair | log2FC | FDR P-value |
|---|---|---|---|
| A112_contig_5096_58 | vegan > omnivore | 1.21696 | 0.00316 |
| A112_contig_5096_58 | vegetarian > omnivore | 1.40152 | 0.00207 |
| A112_contig_5096_60 | vegan > omnivore | 2.53765 | 0.00316 |
| A112_contig_5096_60 | vegetarian > omnivore | 2.22582 | 0.00207 |