Cluster: A112.bin_7_CGC2
🧬 Cluster Details
- Gene Count: 7
- CAZyme Count: 2
- Substrate:
- Genome ID: A112.bin_7
- Continent: Asia
- Source Study: Jin et al., 2023 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | A112_contig_5085 | A112_contig_5085_10 | 10682 | 11572 | - | GH25 |
| TC | A112_contig_5085 | A112_contig_5085_11 | 11575 | 11988 | - | 1.E.19.1.10 |
| NULL(UNKNOWN) | A112_contig_5085 | A112_contig_5085_12 | 12867 | 13025 | + |
NULL(UNKNOWN)
[View Structural Homologs] |
| TF | A112_contig_5085 | A112_contig_5085_13 | 13102 | 13995 | - | HTH_AraC | HTH_AraC |
| CAZyme | A112_contig_5085 | A112_contig_5085_14 | 14145 | 16406 | + | GT35 |
| TC | A112_contig_5085 | A112_contig_5085_15 | 16520 | 17875 | - | 2.A.22.5.3 |
| TC | A112_contig_5085 | A112_contig_5085_16 | 18166 | 20478 | + | 3.A.3.23.2 |
Gene ID: A112_contig_5085_10
Type: CAZyme
Location: 10682 - 11572 (-)
Type: CAZyme
Location: 10682 - 11572 (-)
Gene ID: A112_contig_5085_11
Type: TC
Location: 11575 - 11988 (-)
Type: TC
Location: 11575 - 11988 (-)
Gene ID: A112_contig_5085_12
Type:
Location: 12867 - 13025 (+)
Type:
Location: 12867 - 13025 (+)
Gene ID: A112_contig_5085_13
Type: TF
Location: 13102 - 13995 (-)
Type: TF
Location: 13102 - 13995 (-)
Gene ID: A112_contig_5085_14
Type: CAZyme
Location: 14145 - 16406 (+)
Type: CAZyme
Location: 14145 - 16406 (+)
Gene ID: A112_contig_5085_15
Type: TC
Location: 16520 - 17875 (-)
Type: TC
Location: 16520 - 17875 (-)
Gene ID: A112_contig_5085_16
Type: TC
Location: 18166 - 20478 (+)
Type: TC
Location: 18166 - 20478 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Oscillospirales
Family
Ruminococcaceae
Genus
Ruminococcus_C
Species
Ruminococcus_C sp900545285
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.