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Cluster: A112.bin_7_CGC17

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC A112_contig_9240 A112_contig_9240_51 53448 54740 + 3.A.1.1.28
TC A112_contig_9240 A112_contig_9240_52 54741 55622 + 3.A.1.1.45
TC A112_contig_9240 A112_contig_9240_53 55619 56467 + 3.A.1.1.28
CAZyme A112_contig_9240 A112_contig_9240_54 56559 57977 + GH13_18
CAZyme A112_contig_9240 A112_contig_9240_55 57998 60187 + GH36
TF A112_contig_9240 A112_contig_9240_56 60318 61109 - HTH_AraC
CAZyme A112_contig_9240 A112_contig_9240_57 61369 62709 + GH5_4
TC A112_contig_9240 A112_contig_9240_58 62901 64634 - 3.A.18.1.1
Gene ID: A112_contig_9240_51
Type: TC
Location: 53448 - 54740 (+)
Gene ID: A112_contig_9240_52
Type: TC
Location: 54741 - 55622 (+)
Gene ID: A112_contig_9240_53
Type: TC
Location: 55619 - 56467 (+)
Gene ID: A112_contig_9240_54
Type: CAZyme
Location: 56559 - 57977 (+)
Gene ID: A112_contig_9240_55
Type: CAZyme
Location: 57998 - 60187 (+)
Gene ID: A112_contig_9240_56
Type: TF
Location: 60318 - 61109 (-)
Gene ID: A112_contig_9240_57
Type: CAZyme
Location: 61369 - 62709 (+)
Gene ID: A112_contig_9240_58
Type: TC
Location: 62901 - 64634 (-)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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Differentially Abundant Genes

Gene ID Condition Pair log2FC FDR P-value
A112_contig_9240_58 vegan > omnivore 2.35581 0.00316
A112_contig_9240_58 vegetarian > omnivore 2.29392 0.00207

🧭 Explore Read Mapping of CGC

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