Cluster: A112.bin_7_CGC15
🧬 Cluster Details
- Gene Count: 4
- CAZyme Count: 1
- Substrate:
- Genome ID: A112.bin_7
- CGC Family ID: CGCFAM_03007
- Continent: Asia
- Source Study: Jin et al., 2023 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | A112_contig_5092 | A112_contig_5092_700 | 786985 | 787818 | + | 3.A.1.132.3 |
| TC | A112_contig_5092 | A112_contig_5092_701 | 788092 | 789813 | + | 1.A.11.2.7 |
| TF | A112_contig_5092 | A112_contig_5092_702 | 790198 | 790530 | + | Trp_repressor |
| CAZyme | A112_contig_5092 | A112_contig_5092_703 | 790517 | 793270 | + | CBM3 | GH9 |
Gene ID: A112_contig_5092_700
Type: TC
Location: 786985 - 787818 (+)
Type: TC
Location: 786985 - 787818 (+)
Gene ID: A112_contig_5092_701
Type: TC
Location: 788092 - 789813 (+)
Type: TC
Location: 788092 - 789813 (+)
Gene ID: A112_contig_5092_702
Type: TF
Location: 790198 - 790530 (+)
Type: TF
Location: 790198 - 790530 (+)
Gene ID: A112_contig_5092_703
Type: CAZyme
Location: 790517 - 793270 (+)
Type: CAZyme
Location: 790517 - 793270 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Oscillospirales
Family
Ruminococcaceae
Genus
Ruminococcus_C
Species
Ruminococcus_C sp900545285
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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Differentially Abundant Genes
| Gene ID | Condition Pair | log2FC | FDR P-value |
|---|---|---|---|
| A112_contig_5092_703 | vegan > omnivore | 1.06004 | 0.00316 |