Cluster: A112.bin_7_CGC12
🧬 Cluster Details
- Gene Count: 5
- CAZyme Count: 2
- Substrate:
- Genome ID: A112.bin_7
- Continent: Asia
- Source Study: Jin et al., 2023 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | A112_contig_5092 | A112_contig_5092_585 | 636949 | 639153 | + | GH2 |
| NULL(UNKNOWN) | A112_contig_5092 | A112_contig_5092_586 | 639085 | 639327 | - |
NULL(UNKNOWN)
[View Structural Homologs] |
| pfam | A112_contig_5092 | A112_contig_5092_587 | 639544 | 640428 | - | FAA_hydrolase |
| TC | A112_contig_5092 | A112_contig_5092_588 | 640478 | 641800 | - | 2.A.37.2.2 |
| CAZyme | A112_contig_5092 | A112_contig_5092_589 | 641893 | 644049 | - | CBM3 | GH9 |
Gene ID: A112_contig_5092_585
Type: CAZyme
Location: 636949 - 639153 (+)
Type: CAZyme
Location: 636949 - 639153 (+)
Gene ID: A112_contig_5092_586
Type:
Location: 639085 - 639327 (-)
Type:
Location: 639085 - 639327 (-)
Gene ID: A112_contig_5092_587
Type: pfam
Location: 639544 - 640428 (-)
Type: pfam
Location: 639544 - 640428 (-)
Gene ID: A112_contig_5092_588
Type: TC
Location: 640478 - 641800 (-)
Type: TC
Location: 640478 - 641800 (-)
Gene ID: A112_contig_5092_589
Type: CAZyme
Location: 641893 - 644049 (-)
Type: CAZyme
Location: 641893 - 644049 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Oscillospirales
Family
Ruminococcaceae
Genus
Ruminococcus_C
Species
Ruminococcus_C sp900545285
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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Differentially Abundant Genes
| Gene ID | Condition Pair | log2FC | FDR P-value |
|---|---|---|---|
| A112_contig_5092_587 | vegan > omnivore | 3.99297 | 0.00316 |
| A112_contig_5092_587 | vegetarian > omnivore | 3.85803 | 0.00207 |
| A112_contig_5092_589 | vegan > omnivore | 1.60515 | 0.00316 |
| A112_contig_5092_589 | vegetarian > omnivore | 1.98987 | 0.00207 |