Cluster: A112.bin_6_CGC7
🧬 Cluster Details
- Gene Count: 4
- CAZyme Count: 1
- Substrate:
- Genome ID: A112.bin_6
- Continent: Asia
- Source Study: Jin et al., 2023 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | A112_contig_1332 | A112_contig_1332_453 | 490874 | 492961 | - | 1.B.52.2.2 |
| peptidase | A112_contig_1332 | A112_contig_1332_454 | 492996 | 494795 | - | M03.UPB |
| pfam | A112_contig_1332 | A112_contig_1332_455 | 494959 | 496698 | + | NFACT-R_1 | NFACT_N | NFACT-R_2 |
| CAZyme | A112_contig_1332 | A112_contig_1332_456 | 496690 | 497820 | - | GH105 |
Gene ID: A112_contig_1332_453
Type: TC
Location: 490874 - 492961 (-)
Type: TC
Location: 490874 - 492961 (-)
Gene ID: A112_contig_1332_454
Type: peptidase
Location: 492996 - 494795 (-)
Type: peptidase
Location: 492996 - 494795 (-)
Gene ID: A112_contig_1332_455
Type: pfam
Location: 494959 - 496698 (+)
Type: pfam
Location: 494959 - 496698 (+)
Gene ID: A112_contig_1332_456
Type: CAZyme
Location: 496690 - 497820 (-)
Type: CAZyme
Location: 496690 - 497820 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Lachnospirales
Family
Lachnospiraceae
Genus
Roseburia
Species
Roseburia sp900753715
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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Differentially Abundant Genes
| Gene ID | Condition Pair | log2FC | FDR P-value |
|---|---|---|---|
| A112_contig_1332_456 | vegetarian > vegan | 1.25455 | 0.00226 |